RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 PRR30Q53SZ7 412 aaPredicted RBP3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 ZRANB3Q5FWF4 1079 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 LDLRAP1Q5SW96 308 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 KCTD16Q68DU8 428 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 LCN10Q6JVE6 187 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 RAD9BQ6WBX8 426 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 TMEM26Q6ZUK4 368 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 PRSS42Q7Z5A4 293 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 AMZ2Q86W34 360 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 KRTAP7-1Q8IUC3 87 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 TRAPPC5Q8IUR0 188 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 PQLC3Q8N755 202 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 BMPERQ8N8U9 685 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 GDAP1Q8TB36 358 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 TFB1MQ8WVM0 346 aaKnown RBP3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 PATE1Q8WXA2 126 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 STARD8Q92502 1023 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 P3H4Q92791 437 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 GLYATL1Q969I3 302 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 HAUS1Q96CS2 278 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 C19orf60Q96EN9 201 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 LINGO1Q96FE5 620 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 STAMBPL1Q96FJ0 436 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 IMP4Q96G21 291 aaKnown RBP3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 C9orf72Q96LT7 481 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 TMEM68Q96MH6 324 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 RNF157Q96PX1 679 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 VPS35Q96QK1 796 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 TSC22D3Q99576 134 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 PARD6BQ9BYG5 372 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 TFB2MQ9H5Q4 396 aaKnown RBP3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 VIPAS39Q9H9C1 493 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 VPS37BQ9H9H4 285 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 FANCEQ9HB96 536 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 PDE7BQ9NP56 450 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 SLC40A1Q9NP59 571 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 IL20Q9NYY1 176 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 IFNKQ9P0W0 207 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 EPHA6Q9UF33 1036 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 FAM153AQ9UHL3 310 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 KCNK6Q9Y257 313 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 TMEM184BQ9Y519 407 aaPredicted RBP3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 HEBP2Q9Y5Z4 205 aa3.82□□□□□ -1.8
GTF3C3-207ENST00000451088 LOC101059948A0A1B0GTJ6 334 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 A6NCN8 305 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 ANKUB1A6NFN9 424 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 TRIM64CA6NLI5 447 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 C2orf81A6NN90 581 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 A8MU76 341 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 HACD1B0YJ81 288 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 BLOC1S5-TXNDC5H3BN57 136 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 M0QZ24 198 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 ANKRD28O15084 1053 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 LRRTM2O43300 516 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 ZSCAN12O43309 604 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 PCDH7O60245 1069 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 KLHL41O60662 606 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 CTSVO60911 334 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 ANXA9O76027 345 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 SORBS2O94875 1100 aaKnown RBP3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 SLC4A1P02730 911 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 C9P02748 559 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 VIMP08670 466 aaKnown RBP3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 RPSAP08865 295 aaKnown RBP3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 CTNNA2P26232 953 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 PTGER4P35408 488 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 HMGCLP35914 325 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 DLSTP36957 453 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 SPAM1P38567 509 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 GSDMDP57764 484 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 RPS15P62841 145 aaKnown RBP3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 UBE2IP63279 158 aaKnown RBP3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 PLIN5Q00G26 463 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 ACY1Q03154 408 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 DMPKQ09013 629 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 NIPAL4Q0D2K0 466 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 TMEM115Q12893 351 aaPredicted RBP3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 PRKAA1Q13131 559 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 MAD2L1Q13257 205 aaPredicted RBP3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 TUBB2AQ13885 445 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 KRT33BQ14525 404 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 PRPSAP1Q14558 356 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 SPA17Q15506 151 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 ZNF876PQ49A33 203 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 KRTCAP3Q53RY4 240 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 CMPK2Q5EBM0 449 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 ATP1A1-AS1Q5TC04 95 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 ARMC3Q5W041 872 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 ALS2CLQ60I27 953 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 TXNRD3NBQ6F5E7 133 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 ITPRIPL1Q6GPH6 555 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 THOC7Q6I9Y2 204 aaKnown RBP3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 IRGCQ6NXR0 463 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 CDC73Q6P1J9 531 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 PAPD4Q6PIY7 484 aaKnown RBP3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 ABRAXAS1Q6UWZ7 409 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 GLT6D1Q7Z4J2 308 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 HPS6Q86YV9 775 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 RCOR2Q8IZ40 523 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 HEXDCQ8WVB3 486 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms