RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, human

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-208	ENST00000431611	GXYLT2	A0PJZ3	443 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	TTC36	A6NLP5	189 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	SHISA8	B8ZZ34	492 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611		G3V2L1	256 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611		H7C1Q1	480 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	RSL1D1	O76021	490 aa	Known RBP	13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	AQP8	O94778	261 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	LY6G6D	O95868	133 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	IFI6	P09912	130 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	TBXA2R	P21731	343 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	NAA20	P61599	178 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	PRR5	P85299	388 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	GUSBP1	Q15486	140 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	EXOC3L2	Q2M3D2	409 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	TMEM44	Q2T9K0	475 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	PPP4R4	Q6NUP7	873 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	PRSS57	Q6UWY2	283 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	APOOL	Q6UXV4	268 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	ZYG11A	Q6WRX3	759 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	C20orf204	Q6ZNR8	217 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	YTHDF3	Q7Z739	585 aa	Known RBP	13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	GGN	Q86UU5	652 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	CNPY4	Q8N129	248 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	CIART	Q8N365	385 aa	Predicted RBP	13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	GPR151	Q8TDV0	419 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	PIK3R3	Q92569	461 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	CAVIN3	Q969G5	261 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	ARSG	Q96EG1	525 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	PERP	Q96FX8	193 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	MARK4	Q96L34	752 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	EQTN	Q9NQ60	294 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	TBK1	Q9UHD2	729 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	EMCN	Q9ULC0	261 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	VDAC3	Q9Y277	283 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	VPS13C	Q709C8	3753 aa		13.6	□□□□□ -0.23
CSNK1E-208	ENST00000431611	EIF1AY	O14602	144 aa	Known RBP	13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	GLRA3	O75311	464 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	SEC22B	O75396	215 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	IGKV1D-16	P01601	117 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	PRPS2	P11908	318 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	GPC1	P35052	558 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	EIF1AX	P47813	144 aa	Known RBP	13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	HSPB3	Q12988	150 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	SLC29A2	Q14542	456 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	GRAMD1B	Q3KR37	738 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	VPS26B	Q4G0F5	336 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	CFAP157	Q5JU67	520 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	FRMD7	Q6ZUT3	714 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	C22orf34	Q6ZV56	151 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	ZNF551	Q7Z340	670 aa	Predicted RBP	13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	EXOC3L1	Q86VI1	746 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	IFT20	Q8IY31	132 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	OR6K3	Q8NGY3	331 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	MZB1	Q8WU39	189 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	EGLN2	Q96KS0	407 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	BDH2	Q9BUT1	245 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	HHATL	Q9HCP6	504 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	EMC9	Q9Y3B6	208 aa		13.59	□□□□□ -0.23
CSNK1E-208	ENST00000431611	MED12L	Q86YW9	2145 aa		13.58	□□□□□ -0.23
CSNK1E-208	ENST00000431611		A0A1W2PPM1	405 aa		13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	NKX2-2	O95096	273 aa		13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PLG	P00747	810 aa	Predicted RBP	13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PPP3CB	P16298	524 aa		13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ZNF17	P17021	662 aa		13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	LOX	P28300	417 aa	Predicted RBP	13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	SLC6A8	P48029	635 aa		13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PRKAG1	P54619	331 aa		13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	CTBP2	P56545	445 aa		13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	WDR75	Q8IWA0	830 aa	Known RBP	13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	CEP70	Q8NHQ1	597 aa		13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PPP1R14C	Q8TAE6	165 aa		13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	NUDT8	Q8WV74	236 aa		13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	METTL2A	Q96IZ6	378 aa	Known RBP	13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	IQCG	Q9H095	443 aa	Known RBP	13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PLSCR4	Q9NRQ2	329 aa		13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PAQR5	Q9NXK6	330 aa	Predicted RBP	13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	CLEC4A	Q9UMR7	237 aa		13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611	CCL27	Q9Y4X3	112 aa		13.58	□□□□□ -0.24
CSNK1E-208	ENST00000431611		A0A087WZY1	265 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ALG1L2	C9J202	215 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	SMAD7	O15105	426 aa	Known RBP	13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PDPK1	O15530	556 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	NDUFB5	O43674	189 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	OXSR1	O95747	527 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PROC	P04070	461 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	UROS	P10746	265 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	MAP3K8	P41279	467 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	DNAJB13	P59910	316 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	KIAA0040	Q15053	153 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	BEX5	Q5H9J7	111 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ANKRD26P1	Q6NSI1	321 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	PLEKHM3	Q6ZWE6	761 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	GALNT10	Q86SR1	603 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	CDRT4	Q8N9R6	151 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	OR4C3	Q8NH37	302 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	OR10D3	Q8NH80	312 aa		13.57	□□□□□ -0.24
CSNK1E-208	ENST00000431611	ZFP28	Q8NHY6	868 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms