RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 C4orf36Q96KX1 117 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 NDC1Q9BTX1 674 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 SUV39H2Q9H5I1 410 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 LSM7Q9UK45 103 aaKnown RBP14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 GMEB2Q9UKD1 530 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 SH2B3Q9UQQ2 575 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 SBF1O95248 1867 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 TANC1Q9C0D5 1861 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 A0A1B0GW55 424 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 TRDV1A0A1B0GX56 115 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 FAM74A7A6NL05 159 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 FGBP02675 491 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 FURINP09958 794 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 DUX4L2P0CJ85 424 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 DUX4L3P0CJ86 424 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 DUX4L4P0CJ87 422 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 DUX4L5P0CJ88 424 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 DUX4L6P0CJ89 424 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 DUX4L7P0CJ90 424 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 PIPP12273 146 aaPredicted RBP14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 UQCRC2P22695 453 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 RAE1P78406 368 aaKnown RBP14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 SORDQ00796 357 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 B4GALNT1Q00973 533 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 E2F1Q01094 437 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 FAM74A3Q4VXF1 159 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 CD276Q5ZPR3 534 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 TPRG1Q6ZUI0 275 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 TMEM99Q8N816 258 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 CHST14Q8NCH0 376 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 KIAA1143Q96AT1 154 aaPredicted RBP14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 POLDIP3Q9BY77 421 aaKnown RBP14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 DPH1Q9BZG8 443 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 SCPEP1Q9HB40 452 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 TREM1Q9NP99 234 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 DUX4Q9UBX2 424 aa14.94□□□□□ -0.02
PRPF40B-201ENST00000261897 ZNF705EA8MWA4 302 aaPredicted RBP14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 FLRT2O43155 660 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 CREBL2O60519 120 aaPredicted RBP14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 SEMG1P04279 462 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 FBXO45P0C2W1 286 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 STAT5AP42229 794 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 TDGQ13569 410 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 C3orf38Q5JPI3 329 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 RAB12Q6IQ22 244 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 RSPO2Q6UXX9 243 aaPredicted RBP14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 VRK2Q86Y07 508 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 FAM98AQ8NCA5 519 aaKnown RBP14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 SLC16A10Q8TF71 515 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 UPF1Q92900 1129 aaKnown RBP eCLIP14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 LRIG1Q96JA1 1093 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 GPR137Q96N19 417 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 NOX3Q9HBY0 568 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 GPN1Q9HCN4 374 aaPredicted RBP14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 CLEC4EQ9ULY5 219 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 PPM1DO15297 605 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 SDC3O75056 442 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 PEX14O75381 377 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 CKBP12277 381 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 ACADLP28330 430 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 CAMK2DQ13557 499 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 TAF13Q15543 124 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 FRRS1Q6ZNA5 592 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 RNF44Q7L0R7 432 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 LIN7BQ9HAP6 207 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 GNG8Q9UK08 70 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 NYNRINQ9P2P1 1898 aaKnown RBP14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 SGCEO43556 437 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 RNF13O43567 381 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 GJA5P36382 358 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 OR12D2P58182 307 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 ARHGAP15Q53QZ3 475 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 C10orf53Q8N6V4 93 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 OR2AP1Q8NGE2 309 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 SMPDL3AQ92484 453 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 SORCS2Q96PQ0 1159 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 USB1Q9BQ65 265 aaKnown RBP14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 MFFQ9GZY8 342 aa14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 MYEF2Q9P2K5 600 aaKnown RBP14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 TP53BP1Q12888 1972 aaPredicted RBP14.93□□□□□ -0.02
PRPF40B-201ENST00000261897 A0A087WUU8 490 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 E9PI62 339 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 ATG13O75143 517 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 UBXN7O94888 489 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 FARS2O95363 451 aaKnown RBP14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 ZNF35P13682 527 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 GPR85P60893 370 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 TPBGQ13641 420 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 OR10K1Q8NGX5 313 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 LGALS14Q8TCE9 139 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 C16orf58Q96GQ5 468 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 ZNF354BQ96LW1 612 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 MCHR1Q99705 422 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 MKL2Q9ULH7 1088 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 ACOD1A6NK06 481 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 GAPDHSO14556 408 aaPredicted RBP14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 CD70P32970 193 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 MAPK9P45984 424 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 TNFRSF17Q02223 184 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms