RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 CCDC115Q96NT0 180 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 OR7D2Q96RA2 312 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 OR52E6Q96RD3 313 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 EBF4Q9BQW3 602 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 INPP5KQ9BT40 448 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 UGT2B28Q9BY64 529 aa16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 SDR39U1Q9NRG7 319 aaPredicted RBP16.33■□□□□ 0.2
SNRPA1-201ENST00000254193 ZIC3O60481 467 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 WDR1O75083 606 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 OXSR1O95747 527 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 ANGPTL1O95841 491 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 TBXA2RP21731 343 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 MATN1P21941 496 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 UQCRC2P22695 453 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 AQP5P55064 265 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 NUP107P57740 925 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 GSTA3Q16772 222 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 NHSL2Q5HYW2 709 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 DCST2Q5T1A1 773 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 C1orf185Q5T7R7 199 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 B3GNT6Q6ZMB0 384 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 ULK2Q8IYT8 1036 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 GATSQ8NAP1 163 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 GLB1L3Q8NCI6 653 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 ABTB1Q969K4 478 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 SDCCAG3Q96C92 435 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 SLC35G5Q96KT7 338 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 DIDO1Q9BTC0 2240 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 G6PC3Q9BUM1 346 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 TCF7L2Q9NQB0 619 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 UBQLN4Q9NRR5 601 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 BTNL2Q9UIR0 455 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 DKKL1Q9UK85 242 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 ICE1Q9Y2F5 2266 aa16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 RPH3AQ9Y2J0 694 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 SETXQ7Z333 2677 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-201ENST00000254193 ZNF407Q9C0G0 2248 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 MYO7BQ6PIF6 2116 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 UQCRHLA0A096LP55 91 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 NPIPA5A0A0B4J1W7 369 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 ALG1L2C9J202 215 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 PRSS44E7EML9 344 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 NPIPA7E9PJI5 369 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 GMFGO60234 142 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 C1QCP02747 245 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 NGFRP08138 427 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 NPIPA8P0DM63 369 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 GLI4P10075 376 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 AGAP20933 346 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 ATP6V1C1P21283 382 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 GCKP35557 465 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 ART3Q13508 389 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 IFNEQ86WN2 208 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 OR9I1Q8NGQ6 314 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 GOT1L1Q8NHS2 421 aaPredicted RBP16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 RND1Q92730 232 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 THOC1Q96FV9 657 aaKnown RBP16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 WDYHV1Q96HA8 205 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 SLC35A5Q9BS91 424 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 TTYH2Q9BSA4 534 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 ZIM2Q9NZV7 527 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 CAMK2AQ9UQM7 478 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 PCDHGB3Q9Y5G1 929 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 EML6Q6ZMW3 1958 aa16.31■□□□□ 0.2
SNRPA1-201ENST00000254193 NINQ8N4C6 2090 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 CCDC154A6NI56 674 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 CYSRT1A8MQ03 144 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 KDM4EB2RXH2 506 aaPredicted RBP16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 POLR3GO15318 223 aaPredicted RBP16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 NDUFB5O43674 189 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 SOX30O94993 753 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 ACTL6AO96019 429 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 GSNP06396 782 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 GABRA1P14867 456 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 HPGDP15428 266 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 GRNP28799 593 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 LCN1P31025 176 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 CDKN2CP42773 168 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 ZFP36L2P47974 494 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 STARP49675 285 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 RNF144AP50876 292 aaPredicted RBP16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 GFRA1P56159 465 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 DSCR4P56555 118 aaPredicted RBP16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 C17orf67Q0P5P2 114 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 SAXO2Q658L1 398 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 OLIG3Q7RTU3 272 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 CCDC71Q8IV32 467 aaPredicted RBP16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 MIER2Q8N344 545 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 OR10Q1Q8NGQ4 319 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 SFXN2Q96NB2 322 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 PANX1Q96RD7 426 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 PRDM14Q9GZV8 571 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 OR51I1Q9H343 314 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 COQ3Q9NZJ6 369 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 RNF6Q9Y252 685 aa16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 MRPS18CQ9Y3D5 142 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-201ENST00000254193 IGLV3-32A0A0A0MS00 114 aa16.29■□□□□ 0.2
SNRPA1-201ENST00000254193 DUXAA6NLW8 204 aa16.29■□□□□ 0.2
SNRPA1-201ENST00000254193 AHRRA9YTQ3 701 aa16.29■□□□□ 0.2
SNRPA1-201ENST00000254193 SCDO00767 359 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms