RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 BEST3Q8N1M1 668 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 SPACA9Q96E40 222 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 TMEM19Q96HH6 336 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 CALML5Q9NZT1 146 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 ABI3Q9P2A4 366 aa18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 GMPR2Q9P2T1 348 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-221ENST00000622702 ELOVL7A1L3X0 281 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 GSC2O15499 205 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 SLC28A2O43868 658 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 REM1O75628 298 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 CHRM4P08173 479 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 PCGF2P35227 344 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 CRISP3P54108 245 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 PNLIPRP2P54317 469 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 MFAP5Q13361 173 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 SCARB2Q14108 478 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 VEZF1Q14119 521 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 FXNQ16595 210 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 NTRK2Q16620 822 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 ZNF791Q3KP31 576 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 GPAT3Q53EU6 434 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 REEP3Q6NUK4 255 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 IFNEQ86WN2 208 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 SLC30A8Q8IWU4 369 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 GPALPP1Q8IXQ4 340 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 ZNF843Q8N446 348 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 TMEM156Q8N614 296 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 NFKBIDQ8NI38 313 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 ASB15Q8WXK1 588 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 EFHD2Q96C19 240 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 COL21A1Q96P44 957 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 KCTD14Q9BQ13 255 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 THTPAQ9BU02 230 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 CADM1Q9BY67 442 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 RNF32Q9H0A6 362 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 SAP130Q9H0E3 1048 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 SLC38A1Q9H2H9 487 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 TRIM45Q9H8W5 580 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 ZBTB20Q9HC78 741 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 BCL2L10Q9HD36 194 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 FBXO34Q9NWN3 711 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 USP22Q9UPT9 525 aa18.25■□□□□ 0.51
PDLIM2-221ENST00000622702 RRP9O43818 475 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 OR6B1O95007 311 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 ZIC2O95409 532 aaPredicted RBP18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 H6PDO95479 791 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 ATP6V1C1P21283 382 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 HTR1EP28566 365 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 IL12BP29460 328 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 HLCSP50747 726 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 HPCAP84074 193 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 IGFL2Q6UWQ7 119 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 FRRS1Q6ZNA5 592 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 MICU2Q8IYU8 434 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 RNF148Q8N7C7 305 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 HIPK4Q8NE63 616 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 TNIP2Q8NFZ5 429 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 PMM1Q92871 262 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 ADOQ96SZ5 270 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 TREX2Q9BQ50 279 aaPredicted RBP18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 RUBCNLQ9H714 662 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 PACSIN3Q9UKS6 424 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 WDR45Q9Y484 360 aa18.24■□□□□ 0.51
PDLIM2-221ENST00000622702 DSPPQ9NZW4 1301 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 C5orf58C9J3I9 102 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 KIAA0513O60268 411 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 FCMRO60667 390 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 UGT2B11O75310 529 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 PGM3O95394 542 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 PGM1P36871 562 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 RFX3P48380 749 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 CHRNEQ04844 493 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 EFR3AQ14156 821 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 ZNF468Q5VIY5 522 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 TYW3Q6IPR3 259 aaKnown RBP18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 PGM2L1Q6PCE3 622 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 LINC00696Q6ZRV3 163 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 NUP54Q7Z3B4 507 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 ZAR1Q86SH2 424 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 BBS10Q8TAM1 723 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 SGCZQ96LD1 299 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 MMADHCQ9H3L0 296 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 ANGPT4Q9Y264 503 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 PCDHGA10Q9Y5H3 936 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 EXPH5Q8NEV8 1989 aa18.23■□□□□ 0.51
PDLIM2-221ENST00000622702 A0A0G2JPF8 293 aa18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 HNRNPCL2B2RXH8 293 aa18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 HNRNPCL3B7ZW38 293 aa18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 NPIPB9F8W1W9 429 aa18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 HNRNPCL4P0DMR1 293 aa18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 CYP4B1P13584 511 aa18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 CYB561P49447 251 aa18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 PCBP3P57721 371 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 FBXW4P57775 412 aa18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 INTS11Q5TA45 600 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 OLIG3Q7RTU3 272 aa18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 GALNT10Q86SR1 603 aa18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 HPS6Q86YV9 775 aa18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 ZNF619Q8N2I2 560 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms