RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 ZCCHC3Q9NUD5 404 aaKnown RBP20.55■□□□□ 0.88
CCDC9-204ENST00000599398 FAM120CQ9NX05 1096 aaKnown RBP20.55■□□□□ 0.88
CCDC9-204ENST00000599398 ABCG2Q9UNQ0 655 aa20.55■□□□□ 0.88
CCDC9-204ENST00000599398 NKX2-2O95096 273 aa20.54■□□□□ 0.88
CCDC9-204ENST00000599398 UTS2O95399 124 aa20.54■□□□□ 0.88
CCDC9-204ENST00000599398 ACP2P11117 423 aa20.54■□□□□ 0.88
CCDC9-204ENST00000599398 DPP4P27487 766 aa20.54■□□□□ 0.88
CCDC9-204ENST00000599398 MAGOHP61326 146 aaKnown RBP20.54■□□□□ 0.88
CCDC9-204ENST00000599398 SMU1Q2TAY7 513 aa20.54■□□□□ 0.88
CCDC9-204ENST00000599398 PGS1Q32NB8 556 aa20.54■□□□□ 0.88
CCDC9-204ENST00000599398 SPDYE7PQ495Y7 208 aa20.54■□□□□ 0.88
CCDC9-204ENST00000599398 RIPPLY2Q5TAB7 128 aa20.54■□□□□ 0.88
CCDC9-204ENST00000599398 MFSD12Q6NUT3 480 aa20.54■□□□□ 0.88
CCDC9-204ENST00000599398 NATD1Q8N6N6 113 aa20.54■□□□□ 0.88
CCDC9-204ENST00000599398 SLC16A11Q8NCK7 471 aa20.54■□□□□ 0.88
CCDC9-204ENST00000599398 OR5P2Q8WZ92 322 aa20.54■□□□□ 0.88
CCDC9-204ENST00000599398 OTUB1Q96FW1 271 aaPredicted RBP20.54■□□□□ 0.88
CCDC9-204ENST00000599398 C16orf58Q96GQ5 468 aa20.54■□□□□ 0.88
CCDC9-204ENST00000599398 TRIB1Q96RU8 372 aa20.54■□□□□ 0.88
CCDC9-204ENST00000599398 NUF2Q9BZD4 464 aa20.54■□□□□ 0.88
CCDC9-204ENST00000599398 TBL1XR1Q9BZK7 514 aa20.54■□□□□ 0.88
CCDC9-204ENST00000599398 DSN1Q9H410 356 aa20.54■□□□□ 0.88
CCDC9-204ENST00000599398 SIRT3Q9NTG7 399 aaPredicted RBP20.54■□□□□ 0.88
CCDC9-204ENST00000599398 KDM4EB2RXH2 506 aaPredicted RBP20.53■□□□□ 0.88
CCDC9-204ENST00000599398 CFLARO15519 480 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 TOXO94900 526 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 C6orf47O95873 294 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 EPPINO95925 133 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 IGKV1D-16P01601 117 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 ALOX5P09917 674 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 MAP3K8P41279 467 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 PRIM2P49643 509 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 WNT3P56703 355 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 WDR4P57081 412 aaKnown RBP20.53■□□□□ 0.88
CCDC9-204ENST00000599398 LSM12Q3MHD2 195 aaKnown RBP20.53■□□□□ 0.88
CCDC9-204ENST00000599398 ENPP6Q6UWR7 440 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 MEX3BQ6ZN04 569 aaKnown RBP20.53■□□□□ 0.88
CCDC9-204ENST00000599398 SEM1Q6ZVN7 128 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 GDF7Q7Z4P5 450 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 MARCH3Q86UD3 253 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 TRIM42Q8IWZ5 723 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 RIMKLAQ8IXN7 391 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 COX18Q8N8Q8 333 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 HOXB13Q92826 284 aaPredicted RBP20.53■□□□□ 0.88
CCDC9-204ENST00000599398 COQ8BQ96D53 544 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 SFXN2Q96NB2 322 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 DUSP26Q9BV47 211 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 TMBIM4Q9HC24 238 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 PNPOQ9NVS9 261 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 ASIC5Q9NY37 505 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 NKIRAS1Q9NYS0 192 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 HAO1Q9UJM8 370 aa20.53■□□□□ 0.88
CCDC9-204ENST00000599398 RPH3AQ9Y2J0 694 aaPredicted RBP20.53■□□□□ 0.88
CCDC9-204ENST00000599398 HSPB2A8KAH6 182 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 CCT3P49368 545 aaKnown RBP20.52■□□□□ 0.88
CCDC9-204ENST00000599398 DSCR4P56555 118 aaPredicted RBP20.52■□□□□ 0.88
CCDC9-204ENST00000599398 CLDN8P56748 225 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 SRYQ05066 204 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 TP53BP2Q13625 1128 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 RCAN2Q14206 197 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 LASP1Q14847 261 aaKnown RBP20.52■□□□□ 0.88
CCDC9-204ENST00000599398 HSPB2Q16082 182 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 DUSP5Q16690 384 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 GRAMD1BQ3KR37 738 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 AAGABQ6PD74 315 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 ZCCHC12Q6PEW1 402 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 FIGNL1Q6PIW4 674 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 LACC1Q8IV20 430 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 TNIP2Q8NFZ5 429 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 DUSP19Q8WTR2 217 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 SPOCK3Q9BQ16 436 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 RTN4RQ9BZR6 473 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 BHLHE41Q9C0J9 482 aaPredicted RBP20.52■□□□□ 0.88
CCDC9-204ENST00000599398 MED11Q9P086 117 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 PCNX3Q9H6A9 2034 aa20.52■□□□□ 0.88
CCDC9-204ENST00000599398 CREBBPQ92793 2442 aa20.51■□□□□ 0.87
CCDC9-204ENST00000599398 B4DXG7 233 aa20.51■□□□□ 0.87
CCDC9-204ENST00000599398 H0Y3Z8 333 aa20.51■□□□□ 0.87
CCDC9-204ENST00000599398 IL2RAP01589 272 aa20.51■□□□□ 0.87
CCDC9-204ENST00000599398 HMGN2P05204 90 aaKnown RBP20.51■□□□□ 0.87
CCDC9-204ENST00000599398 DIO3P55073 304 aa20.51■□□□□ 0.87
CCDC9-204ENST00000599398 TFF3Q07654 80 aa20.51■□□□□ 0.87
CCDC9-204ENST00000599398 NSUN5P2Q63ZY6 315 aa20.51■□□□□ 0.87
CCDC9-204ENST00000599398 LIX1LQ8IVB5 337 aa20.51■□□□□ 0.87
CCDC9-204ENST00000599398 FADS6Q8N9I5 356 aa20.51■□□□□ 0.87
CCDC9-204ENST00000599398 OR2M3Q8NG83 312 aa20.51■□□□□ 0.87
CCDC9-204ENST00000599398 OR56A1Q8NGH5 318 aa20.51■□□□□ 0.87
CCDC9-204ENST00000599398 DPY30Q9C005 99 aa20.51■□□□□ 0.87
CCDC9-204ENST00000599398 ENKD1Q9H0I2 346 aa20.51■□□□□ 0.87
CCDC9-204ENST00000599398 CXorf36Q9H7Y0 433 aa20.51■□□□□ 0.87
CCDC9-204ENST00000599398 PTGES2Q9H7Z7 377 aa20.51■□□□□ 0.87
CCDC9-204ENST00000599398 NEUROD4Q9HD90 331 aa20.51■□□□□ 0.87
CCDC9-204ENST00000599398 MRPS18CQ9Y3D5 142 aaKnown RBP20.51■□□□□ 0.87
CCDC9-204ENST00000599398 KIAA1549Q9HCM3 1950 aa20.51■□□□□ 0.87
CCDC9-204ENST00000599398 DOCK7Q96N67 2140 aa20.5■□□□□ 0.87
CCDC9-204ENST00000599398 DCHS2Q6V1P9 2916 aa20.5■□□□□ 0.87
CCDC9-204ENST00000599398 KCNK2O95069 426 aa20.5■□□□□ 0.87
CCDC9-204ENST00000599398 MSX1P28360 303 aa20.5■□□□□ 0.87
CCDC9-204ENST00000599398 SOAT1P35610 550 aa20.5■□□□□ 0.87
CCDC9-204ENST00000599398 STARP49675 285 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms