RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 OR10Z1Q8NGY1 313 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 XAGE5Q8WWM1 108 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 MGLLQ99685 303 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 YIPF4Q9BSR8 244 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 A4GALTQ9NPC4 353 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 RLIMQ9NVW2 624 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 LINC00854A0A1B0GVQ3 168 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 I3L521 148 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 CELA2BP08218 269 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 CSF3P09919 207 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 ZNF888P0CJ79 500 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 HSMCR30P0CW71 290 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 AZGP1P25311 298 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 DUSP2Q05923 314 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 RUNX1T1Q06455 604 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 RGS1Q08116 209 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 MRM1Q6IN84 353 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 GPR153Q6NV75 609 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 PAMR1Q6UXH9 720 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 OLIG3Q7RTU3 272 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 SLC5A8Q8N695 610 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 OR8H1Q8NGG4 311 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 PMEPA1Q969W9 287 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 SLC22A18Q96BI1 424 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 CNRIP1Q96F85 164 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 ZNF764Q96H86 408 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 GPR137Q96N19 417 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 MAPKAP1Q9BPZ7 522 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 TAPBPLQ9BX59 468 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 BARHL1Q9BZE3 327 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 OR51I1Q9H343 314 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 THSD1Q9NS62 852 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 USP36Q9P275 1121 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 SLC28A2O43868 658 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 GPX5O75715 221 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 SERPINI2O75830 405 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 VIPP01282 170 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 UGT2B7P16662 529 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 BMP8BP34820 402 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 RPS19P39019 145 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 ST3GAL4Q11206 333 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 CCDC85BQ15834 202 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 SYPL1Q16563 259 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 TSTQ16762 297 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 PDZK1Q5T2W1 519 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 Q6ZPB1 254 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 ZNF605Q86T29 641 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 SLC30A8Q8IWU4 369 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 LAX1Q8IWV1 398 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 SRFBP1Q8NEF9 429 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 OR10G2Q8NGC3 310 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 ZCCHC10Q8TBK6 192 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 GIMAP1Q8WWP7 306 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 SLC35G5Q96KT7 338 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 GPR174Q9BXC1 333 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 POLMQ9NP87 494 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 GPR83Q9NYM4 423 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 ALG5Q9Y673 324 aa15.99■□□□□ 0.15
SHKBP1-205ENST00000594973 PRAMEF26H0Y7S4 382 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 CTSVO60911 334 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 IFNW1P05000 195 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 RABIFP47224 123 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 PER3P56645 1201 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 B2MP61769 119 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 RPS15AP62244 130 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 PUM1Q14671 1186 aaKnown RBP eCLIP15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 KIR2DS3Q14952 304 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 MLC1Q15049 377 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 FBXO42Q6P3S6 717 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 TMEM107Q6UX40 140 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 FAM131AQ6UXB0 335 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 ASPGQ86U10 573 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 GPALPP1Q8IXQ4 340 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 C9orf62Q8N4C0 152 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 DUSP18Q8NEJ0 188 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 FLVCR1-AS1Q8TAF5 88 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 RLN3Q8WXF3 142 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 RSPO3Q9BXY4 272 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 ANKRA2Q9H9E1 313 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 IL20Q9NYY1 176 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 ENTPD4Q9Y227 616 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 HS3ST3A1Q9Y663 406 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 SLCO1B1Q9Y6L6 691 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 SCN3AQ9NY46 2000 aa15.98■□□□□ 0.15
SHKBP1-205ENST00000594973 PCDH17O14917 1159 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 PLA2G10O15496 165 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 NDUFA2O43678 99 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 RFPL3O75679 317 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 RECKO95980 971 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 TNFP01375 233 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 POU2F1P14859 743 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 XCR1P46094 333 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 ETV1P50549 477 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 CRISP3P54108 245 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 RRAS2P62070 204 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 MRPL28Q13084 256 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 CHRDL2Q6WN34 429 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 PLEKHM3Q6ZWE6 761 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 HMGN2P46Q86SG4 172 aa15.97■□□□□ 0.15
SHKBP1-205ENST00000594973 ZNF761Q86XN6 746 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms