RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 UQCRFS1P47985 274 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 RPS26P62854 115 aaKnown RBP13.71□□□□□ -0.21
RNF4-210ENST00000508235 ESPL1Q14674 2120 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 CMPK2Q5EBM0 449 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 CCNJQ5T5M9 372 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 CGB2Q6NT52 195 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 C16orf62Q7Z3J2 963 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 FUNDC1Q8IVP5 155 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 CLEC4FQ8N1N0 589 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 OR5D16Q8NGK9 328 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 GTF2H4Q92759 462 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 OTUB1Q96FW1 271 aaPredicted RBP13.71□□□□□ -0.21
RNF4-210ENST00000508235 DEFB127Q9H1M4 99 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 RAD21L1Q9H4I0 556 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 ZNF385DQ9H6B1 395 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 LDAHQ9H6V9 325 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 ACKR4Q9NPB9 350 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 PLSCR2Q9NRY7 297 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 PPP4R1LQ9P1A2 415 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 C15orf41Q9Y2V0 281 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 ZNF462Q96JM2 2506 aa13.71□□□□□ -0.21
RNF4-210ENST00000508235 A0A096LPI6 279 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 A0A1W2PP18 115 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 OR14I1A6ND48 311 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 SCDO00767 359 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 GNB5O14775 395 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 SCO2O43819 266 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 IGKV1D-16P01601 117 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 IGHG3P01860 377 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 GSNP06396 782 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 RFPL3SP0C7P2 107 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 ABOP16442 354 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 TBXA2RP21731 343 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 PTPN6P29350 595 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 ADSLP30566 484 aaPredicted RBP13.7□□□□□ -0.22
RNF4-210ENST00000508235 HPCAP84074 193 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 C17orf67Q0P5P2 114 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 TOMM20Q15388 145 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 GRAMD1BQ3KR37 738 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 ARHGAP11BQ3KRB8 267 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 FNDC7Q5VTL7 733 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 DNAJC14Q6Y2X3 702 aaPredicted RBP13.7□□□□□ -0.22
RNF4-210ENST00000508235 RNF130Q86XS8 419 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 PLCZ1Q86YW0 608 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 CHDHQ8NE62 594 aaPredicted RBP13.7□□□□□ -0.22
RNF4-210ENST00000508235 ZFP90Q8TF47 636 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 XAGE5Q8WWM1 108 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 GNRHR2Q96P88 292 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 SERHL2Q9H4I8 314 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 EXO5Q9H790 373 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 THUMPD1Q9NXG2 353 aaKnown RBP13.7□□□□□ -0.22
RNF4-210ENST00000508235 NCKAP5O14513 1909 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 BSNQ9UPA5 3926 aa13.7□□□□□ -0.22
RNF4-210ENST00000508235 TRGV5A0A0B4J1U4 118 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 A0A1B0GTH9 108 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 A0A1B0GUH1 482 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 A0A1B0GVC2 190 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 A0A1W2PQD3 144 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 GMNCA6NCL1 334 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 ALG1L2C9J202 215 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 ANGPT2O15123 496 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 NDUFB5O43674 189 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 SLC19A2O60779 497 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 STX11O75558 287 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 TRAPPC6AO75865 159 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 PDE9AO76083 593 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 OXSR1O95747 527 aaPredicted RBP13.69□□□□□ -0.22
RNF4-210ENST00000508235 GUSBP08236 651 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 STSP08842 583 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 ENDOUP21128 410 aaKnown RBP13.69□□□□□ -0.22
RNF4-210ENST00000508235 PPIBP23284 216 aaKnown RBP13.69□□□□□ -0.22
RNF4-210ENST00000508235 LSP1P33241 339 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 PTGS2P35354 604 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 GCKP35557 465 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 GAS1P54826 345 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 MAPRE2Q15555 327 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 EIF2S3LQ2VIR3 472 aaKnown RBP13.69□□□□□ -0.22
RNF4-210ENST00000508235 HEPHL1Q6MZM0 1159 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 TNFAIP8L2Q6P589 184 aaPredicted RBP13.69□□□□□ -0.22
RNF4-210ENST00000508235 SLC2A7Q6PXP3 512 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 TRILQ7L0X0 811 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 SPPL2CQ8IUH8 684 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 MISPQ8IVT2 679 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 EID3Q8N140 333 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 WDSUB1Q8N9V3 476 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 OR4C3Q8NH37 302 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 C10orf82Q8WW14 230 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 OIT3Q8WWZ8 545 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 SDF2Q99470 211 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 UBQLN3Q9H347 655 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 PTGES2Q9H7Z7 377 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 TPT1P8Q9HAU6 139 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 SLC52A3Q9NQ40 469 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 POLE3Q9NRF9 147 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 LEF1Q9UJU2 399 aaPredicted RBP13.69□□□□□ -0.22
RNF4-210ENST00000508235 LIPT1Q9Y234 373 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 OSGIN2Q9Y236 505 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 ZNF835Q9Y2P0 537 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 NDUFAF1Q9Y375 327 aa13.69□□□□□ -0.22
RNF4-210ENST00000508235 KCNE3Q9Y6H6 103 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms