RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 TRIM23P36406 574 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 STX1BP61266 288 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 HERV-K104P63124 156 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 IL18R1Q13478 541 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 TYSND1Q2T9J0 566 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 GPAT3Q53EU6 434 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 NKAIN2Q5VXU1 208 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 B3GLCTQ6Y288 498 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 LINC00696Q6ZRV3 163 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 ZNF429Q86V71 674 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 SLC22A16Q86VW1 577 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 CHCHD4Q8N4Q1 142 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 MLKLQ8NB16 471 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 C20orf203Q8NBC4 194 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 FAM46BQ96A09 425 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 FGGYQ96C11 551 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 MRPL53Q96EL3 112 aaKnown RBP1.06□□□□□ -2.24
CCDC93-209ENST00000488908 C11orf24Q96F05 449 aaPredicted RBP1.06□□□□□ -2.24
CCDC93-209ENST00000488908 ACCSQ96QU6 501 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 SPIN2AQ99865 258 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 SPIN2BQ9BPZ2 258 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 RIOK1Q9BRS2 568 aaKnown RBP1.06□□□□□ -2.24
CCDC93-209ENST00000488908 APOOQ9BUR5 198 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 ABCG8Q9H221 673 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 AKIRIN1Q9H9L7 192 aaPredicted RBP1.06□□□□□ -2.24
CCDC93-209ENST00000488908 ELOVL2Q9NXB9 296 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 MAD2L2Q9UI95 211 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 LCMT1Q9UIC8 334 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 TBX21Q9UL17 535 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 ENTPD4Q9Y227 616 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 LIPT1Q9Y234 373 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 RPH3AQ9Y2J0 694 aaPredicted RBP1.06□□□□□ -2.24
CCDC93-209ENST00000488908 GRIN2DO15399 1336 aa1.06□□□□□ -2.24
CCDC93-209ENST00000488908 NKX2-6A6NCS4 301 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 SLC28A1O00337 649 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 RAMP1O60894 148 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 NME6O75414 186 aaPredicted RBP1.05□□□□□ -2.24
CCDC93-209ENST00000488908 PNMTP11086 282 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 VCLP18206 1134 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 MAT2AP31153 395 aaKnown RBP1.05□□□□□ -2.24
CCDC93-209ENST00000488908 NSFP46459 744 aaKnown RBP1.05□□□□□ -2.24
CCDC93-209ENST00000488908 STK19P49842 368 aaPredicted RBP1.05□□□□□ -2.24
CCDC93-209ENST00000488908 SERPINH1P50454 418 aaKnown RBP1.05□□□□□ -2.24
CCDC93-209ENST00000488908 NOP14P78316 857 aaKnown RBP1.05□□□□□ -2.24
CCDC93-209ENST00000488908 OTUD4Q01804 1114 aaKnown RBP1.05□□□□□ -2.24
CCDC93-209ENST00000488908 UBXN1Q04323 297 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 NPRL3Q12980 569 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 DPYSL3Q14195 570 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 GK2Q14410 553 aaPredicted RBP1.05□□□□□ -2.24
CCDC93-209ENST00000488908 CYP51A1Q16850 503 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 KRTAP13-2Q52LG2 175 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 IFI44LQ53G44 452 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 LINC00483Q53H64 154 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 UFSP1Q6NVU6 142 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 GALNTL5Q7Z4T8 443 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 HMGN2P46Q86SG4 172 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 MYOCDQ8IZQ8 938 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 OR8H3Q8N146 312 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 FAM71E2Q8N5Q1 922 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 NAT8LQ8N9F0 302 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 OR9A1PQ8NGU1 263 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 DLX4Q92988 240 aaPredicted RBP1.05□□□□□ -2.24
CCDC93-209ENST00000488908 MCHR2Q969V1 340 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 EPSTI1Q96J88 318 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 GPR137Q96N19 417 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 ZNF641Q96N77 438 aaPredicted RBP1.05□□□□□ -2.24
CCDC93-209ENST00000488908 FAM213AQ9BRX8 229 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 TM2D1Q9BX74 207 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 TRPV6Q9H1D0 765 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 ZWILCHQ9H900 591 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 PNPLA3Q9NST1 481 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 ZCCHC3Q9NUD5 404 aaKnown RBP1.05□□□□□ -2.24
CCDC93-209ENST00000488908 EHFQ9NZC4 300 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 TRPC4Q9UBN4 977 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 DNAJB9Q9UBS3 223 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 ZNF225Q9UK10 706 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 USP6P35125 1406 aa1.05□□□□□ -2.24
CCDC93-209ENST00000488908 IGHV7-81A0A0B4J1V7 117 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 ATP6V1G1O75348 118 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 ZNF254O75437 659 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 CABYRO75952 493 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 ANP32DO95626 131 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 IGSF6O95976 241 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 INSP01308 110 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 PCCAP05165 728 aaPredicted RBP1.04□□□□□ -2.24
CCDC93-209ENST00000488908 ZNF18P17022 549 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 NTSP30990 170 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 CTNNB1P35222 781 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 TCF7P36402 384 aaPredicted RBP1.04□□□□□ -2.24
CCDC93-209ENST00000488908 RPL4P36578 427 aaKnown RBP1.04□□□□□ -2.24
CCDC93-209ENST00000488908 RPS9P46781 194 aaKnown RBP1.04□□□□□ -2.24
CCDC93-209ENST00000488908 CSNK1DP48730 415 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 CCZ1BP86790 482 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 CCZ1P86791 482 aaPredicted RBP1.04□□□□□ -2.24
CCDC93-209ENST00000488908 YWHAHQ04917 246 aaPredicted RBP1.04□□□□□ -2.24
CCDC93-209ENST00000488908 DPYSQ14117 519 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 RAB35Q15286 201 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 PKN2Q16513 984 aaKnown RBP1.04□□□□□ -2.24
CCDC93-209ENST00000488908 PRAMEF8Q5VWM4 474 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 DPY19L2P2Q6ZN68 376 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms