RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 APOFQ13790 326 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 MAPRE2Q15555 327 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 SGCBQ16585 318 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 TRMT5Q32P41 509 aaKnown RBP3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 SPANXN4Q5MJ08 99 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 PRAMEF8Q5VWM4 474 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 FBXL22Q6P050 247 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 CD164L2Q6UWJ8 174 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 CCBE1Q6UXH8 406 aaPredicted RBP3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 SIGLEC15Q6ZMC9 328 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 GDPGP1Q6ZNW5 385 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 Q71RC1 249 aaPredicted RBP3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 PRSS42Q7Z5A4 293 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 ZNF410Q86VK4 478 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 DDX60Q8IY21 1712 aaKnown RBP3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 TDHQ8IZJ6 230 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 ELMOD1Q8N336 334 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 KIF2BQ8N4N8 673 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 RTL3Q8N8U3 475 aaKnown RBP3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 LILRB4Q8NHJ6 448 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 SLC2A14Q8TDB8 520 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 SNED1Q8TER0 1413 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 GANCQ8TET4 914 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 GIPC3Q8TF64 312 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 SEPT8Q92599 483 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 PTPRUQ92729 1446 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 GGHQ92820 318 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 PEX13Q92968 403 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 STMN2Q93045 179 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 CEP19Q96LK0 163 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 SERPINB12Q96P63 405 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 GAL3ST4Q96RP7 486 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 LGMNQ99538 433 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 PKP2Q99959 881 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 RBM4BQ9BQ04 359 aaKnown RBP3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 UQCC2Q9BRT2 126 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 OSBPL8Q9BZF1 889 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 SHCBP1LQ9BZQ2 653 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 SLC39A8Q9C0K1 460 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 ZDHHC6Q9H6R6 413 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 PSTPIP2Q9H939 334 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 GPN1Q9HCN4 374 aaPredicted RBP3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 DIABLOQ9NR28 239 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 FGFR1OP2Q9NVK5 253 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 KLK11Q9UBX7 282 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 TRIM10Q9UDY6 481 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 MTRF1LQ9UGC7 380 aaKnown RBP3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 PARP4Q9UKK3 1724 aaKnown RBP3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 ERVK-19Q9WJR5 959 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 FAM208AQ9UK61 1670 aaKnown RBP3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 NID2Q14112 1375 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 SPATA31D1Q6ZQQ2 1576 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 A0A0A6YYC8 382 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 TMEM129A0AVI4 362 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ASB14A6NK59 587 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ZNF732B4DXR9 585 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 TCP11X1B4DZS4 312 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 H0YJX3 145 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 I3L1I5 382 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 RNF103O00237 685 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 SOCS3O14543 225 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 BET1O15155 118 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ACOX3O15254 700 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 SIGLEC5O15389 551 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 MLNRO43193 412 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 RANBP6O60518 1105 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ENTPD5O75356 428 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 SURF6O75683 361 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 TNFAIP8O95379 198 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 STAMBPO95630 424 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 UBTFL1P0CB47 393 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 UBTFL6P0CB48 400 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 OCM2P0CE71 109 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 OCMP0CE72 109 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ETS2P15036 469 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ANPEPP15144 967 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 MYOGP15173 224 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 IL4RP24394 825 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 PRDX6P30041 224 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 OXTRP30559 389 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 SLC1A1P43005 524 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ALDH3B2P48448 385 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 HSPA13P48723 471 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 NT5C2P49902 561 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 AP3M2P53677 418 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ACTR3P61158 418 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 NAA20P61599 178 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 MS4A2Q01362 244 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 MECOMQ03112 1051 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ELAVL2Q12926 359 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 CEACAM7Q14002 265 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 RGS21Q2M5E4 152 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 MAJINQ3KP22 176 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ACSBG2Q5FVE4 666 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ZNF658Q5TYW1 1059 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 AGAP7PQ5VUJ5 663 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ZNF776Q68DI1 518 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 DUPD1Q68J44 220 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 ETFRF1Q6IPR1 90 aa3.22□□□□□ -1.89
ECHDC1-217ENST00000488087 CGB2Q6NT52 195 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms