RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 PNPLA3Q9NST1 481 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 GPATCH2Q9NW75 528 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 FAM120CQ9NX05 1096 aaKnown RBP11.77□□□□□ -0.53
COL5A1-206ENST00000465877 GPR45Q9Y5Y3 372 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 USH1CQ9Y6N9 552 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 UNC79Q9P2D8 2635 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 PCNX3Q9H6A9 2034 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 ADGRG4Q8IZF6 3080 aa11.77□□□□□ -0.53
COL5A1-206ENST00000465877 FIGNL2A6NMB9 653 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 B4DXG7 233 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 C9JVG2 144 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 E9PLN8 166 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 FADS1O60427 444 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 SCN2BO60939 215 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 TRAPPC6AO75865 159 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 CLDN1O95832 211 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 KRT16P08779 473 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 IDO1P14902 403 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 STX5Q13190 355 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 GRAMD1BQ3KR37 738 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 PDCD4Q53EL6 469 aaKnown RBP11.76□□□□□ -0.53
COL5A1-206ENST00000465877 ANXA8L1Q5VT79 327 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 FIGNL1Q6PIW4 674 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 MAMDC2Q7Z304 686 aaPredicted RBP11.76□□□□□ -0.53
COL5A1-206ENST00000465877 PLCZ1Q86YW0 608 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 WDSUB1Q8N9V3 476 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 FAM83FQ8NEG4 500 aaPredicted RBP11.76□□□□□ -0.53
COL5A1-206ENST00000465877 OR5M9Q8NGP3 310 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 CDS1Q92903 461 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 SLC35G5Q96KT7 338 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 VKORC1Q9BQB6 163 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 ACTRT3Q9BYD9 372 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 OR2B2Q9GZK3 357 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 DUSP22Q9NRW4 184 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 PPP4R1LQ9P1A2 415 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 PLEKHB1Q9UF11 243 aaPredicted RBP11.76□□□□□ -0.53
COL5A1-206ENST00000465877 MED12Q93074 2177 aa11.76□□□□□ -0.53
COL5A1-206ENST00000465877 UQCRHLA0A096LP55 91 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 C15orf38-AP3S2A0A0A6YYH1 394 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 POLR3GO15318 223 aaPredicted RBP11.75□□□□□ -0.53
COL5A1-206ENST00000465877 KCNK2O95069 426 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 UTS2O95399 124 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 GP1BBP13224 206 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 S100A3P33764 101 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 RPS26P62854 115 aaKnown RBP11.75□□□□□ -0.53
COL5A1-206ENST00000465877 PHC1P78364 1004 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 POU6F2P78424 691 aaPredicted RBP11.75□□□□□ -0.53
COL5A1-206ENST00000465877 CRYZQ08257 329 aaKnown RBP11.75□□□□□ -0.53
COL5A1-206ENST00000465877 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.75□□□□□ -0.53
COL5A1-206ENST00000465877 EIPR1Q53HC9 387 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 WIPI1Q5MNZ9 446 aaPredicted RBP11.75□□□□□ -0.53
COL5A1-206ENST00000465877 CCNJQ5T5M9 372 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 WLSQ5T9L3 541 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 BHLHB9Q6PI77 547 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 EPGNQ6UW88 154 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 ZAR1Q86SH2 424 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 RPRMLQ8N4K4 120 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 MARVELD2Q8N4S9 558 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 ZNF808Q8N4W9 903 aaPredicted RBP11.75□□□□□ -0.53
COL5A1-206ENST00000465877 OR5D16Q8NGK9 328 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 DTNBP1Q96EV8 351 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 MAGEB18Q96M61 343 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 ZBTB18Q99592 522 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 BTBD2Q9BX70 525 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 TBL1XR1Q9BZK7 514 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 PIGUQ9H490 435 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 SERHL2Q9H4I8 314 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 GIN1Q9NXP7 522 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 DKKL1Q9UK85 242 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 FBXL2Q9UKC9 423 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 FAF1Q9UNN5 650 aaPredicted RBP11.75□□□□□ -0.53
COL5A1-206ENST00000465877 SLC6A5Q9Y345 797 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 CENPEQ02224 2701 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 DOCK7Q96N67 2140 aa11.75□□□□□ -0.53
COL5A1-206ENST00000465877 PRSS51A0A1B0GVH4 220 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 UBDO15205 165 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 WDR1O75083 606 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 CBR3O75828 277 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 CPSF4O95639 269 aaKnown RBP11.74□□□□□ -0.53
COL5A1-206ENST00000465877 OXSR1O95747 527 aaPredicted RBP11.74□□□□□ -0.53
COL5A1-206ENST00000465877 PGRP06401 933 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 NGFRP08138 427 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 ACVR2AP27037 513 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 IL12AP29459 219 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 SRD5A2P31213 254 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 SMSP52788 366 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 GSTA3Q16772 222 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 NHSL2Q5HYW2 709 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 DCST1Q5T197 706 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 DCST2Q5T1A1 773 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 OR5M10Q6IEU7 315 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 ZNF585AQ6P3V2 769 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 ACAD11Q709F0 780 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 MRGPRGQ86SM5 289 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 YRDCQ86U90 279 aaKnown RBP11.74□□□□□ -0.53
COL5A1-206ENST00000465877 IFNEQ86WN2 208 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 CLEC4FQ8N1N0 589 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 FADS6Q8N9I5 356 aa11.74□□□□□ -0.53
COL5A1-206ENST00000465877 GLB1L3Q8NCI6 653 aaPredicted RBP11.74□□□□□ -0.53
COL5A1-206ENST00000465877 VPS37AQ8NEZ2 397 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms