RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 RAB40AQ8WXH6 277 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 TMEM41AQ96HV5 264 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 LINC00052Q96N35 136 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 CAMK2AQ9UQM7 478 aa9.78□□□□□ -0.84
LIN54-202ENST00000442461 OR2AG2A6NM03 316 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 ZBTB7AO95365 584 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 CSNK2A2P19784 350 aaPredicted RBP9.77□□□□□ -0.84
LIN54-202ENST00000442461 GIPRP48546 466 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 EVX1P49640 407 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 IFITM3Q01628 133 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 IRF4Q15306 451 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 CCNJQ5T5M9 372 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 GPR139Q6DWJ6 353 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 UNQ6126/PRO20091Q6UXV3 157 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 HFE2Q6ZVN8 426 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 KIAA0907Q7Z7F0 614 aaPredicted RBP9.77□□□□□ -0.84
LIN54-202ENST00000442461 NUDT13Q86X67 352 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 TEX19Q8NA77 164 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 GTF3C2Q8WUA4 911 aaPredicted RBP9.77□□□□□ -0.84
LIN54-202ENST00000442461 FRZBQ92765 325 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 PTP4A1Q93096 173 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 CDCA4Q9BXL8 241 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 SPATC1LQ9H0A9 340 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 SMOC2Q9H3U7 446 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 CDCP1Q9H5V8 836 aa9.77□□□□□ -0.84
LIN54-202ENST00000442461 A0A0B4J2A0 478 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 CACNB4O00305 520 aaPredicted RBP9.77□□□□□ -0.85
LIN54-202ENST00000442461 DFFBO76075 338 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 APBA3O96018 575 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 GBAP04062 536 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 ERCC1P07992 297 aaPredicted RBP9.77□□□□□ -0.85
LIN54-202ENST00000442461 LAMP1P11279 417 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 IFNGR1P15260 489 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 AHCYP23526 432 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 LILRA4P59901 499 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 HOXC5Q00444 222 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 ELAVL2Q12926 359 aaKnown RBP9.77□□□□□ -0.85
LIN54-202ENST00000442461 TCEA2Q15560 299 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.77□□□□□ -0.85
LIN54-202ENST00000442461 CLEC20AQ6ZU45 233 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 SMIM15Q7Z3B0 74 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 CPOQ8IVL8 374 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 KLHDC8BQ8IXV7 354 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 KIAA1958Q8N8K9 716 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 SCGB1C1Q8TD33 95 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 KCTD13Q8WZ19 329 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 PMM1Q92871 262 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 OR14A2Q96R54 314 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 OCSTAMPQ9BR26 566 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 SHPKQ9UHJ6 478 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 PURGQ9UJV8 347 aaKnown RBP9.77□□□□□ -0.85
LIN54-202ENST00000442461 WIF1Q9Y5W5 379 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 SETD1AO15047 1707 aaKnown RBP9.77□□□□□ -0.85
LIN54-202ENST00000442461 MYBPHLA2RUH7 354 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 ZNF736B4DX44 427 aaPredicted RBP9.77□□□□□ -0.85
LIN54-202ENST00000442461 OR2T1O43869 369 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 AGR2O95994 175 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 MPIP34949 423 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 NAA10P41227 235 aaPredicted RBP9.77□□□□□ -0.85
LIN54-202ENST00000442461 RPS13P62277 151 aaKnown RBP9.77□□□□□ -0.85
LIN54-202ENST00000442461 TNK1Q13470 666 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 MAPK14Q16539 360 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 SLC5A12Q1EHB4 618 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 ALG11Q2TAA5 492 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 PDZD11Q5EBL8 140 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 SDHAF4Q5VUM1 108 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 ETFRF1Q6IPR1 90 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 HSD17B13Q7Z5P4 300 aaPredicted RBP9.77□□□□□ -0.85
LIN54-202ENST00000442461 THOC6Q86W42 341 aaKnown RBP9.77□□□□□ -0.85
LIN54-202ENST00000442461 ARRDC4Q8NCT1 418 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 SLC30A7Q8NEW0 376 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 BBS10Q8TAM1 723 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 THEM6Q8WUY1 208 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 MARVELD3Q96A59 401 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 C1orf74Q96LT6 269 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 NLE1Q9NVX2 485 aaPredicted RBP9.77□□□□□ -0.85
LIN54-202ENST00000442461 FBXL12Q9NXK8 326 aa9.77□□□□□ -0.85
LIN54-202ENST00000442461 DIMT1Q9UNQ2 313 aaKnown RBP9.77□□□□□ -0.85
LIN54-202ENST00000442461 A0A1B0GVT2 93 aa9.76□□□□□ -0.85
LIN54-202ENST00000442461 ZNF587BE7ETH6 402 aa9.76□□□□□ -0.85
LIN54-202ENST00000442461 PRICKLE3O43900 615 aaPredicted RBP9.76□□□□□ -0.85
LIN54-202ENST00000442461 TBL1XO60907 577 aa9.76□□□□□ -0.85
LIN54-202ENST00000442461 HLA-AP01891 365 aaKnown RBP9.76□□□□□ -0.85
LIN54-202ENST00000442461 NR2C1P13056 603 aa9.76□□□□□ -0.85
LIN54-202ENST00000442461 HSD3B2P26439 372 aa9.76□□□□□ -0.85
LIN54-202ENST00000442461 FAM46CQ5VWP2 391 aa9.76□□□□□ -0.85
LIN54-202ENST00000442461 SFXN4Q6P4A7 337 aa9.76□□□□□ -0.85
LIN54-202ENST00000442461 LINGO4Q6UY18 593 aa9.76□□□□□ -0.85
LIN54-202ENST00000442461 SLC29A4Q7RTT9 530 aa9.76□□□□□ -0.85
LIN54-202ENST00000442461 GPR135Q8IZ08 494 aa9.76□□□□□ -0.85
LIN54-202ENST00000442461 C2orf73Q8N5S3 287 aaPredicted RBP9.76□□□□□ -0.85
LIN54-202ENST00000442461 COX18Q8N8Q8 333 aa9.76□□□□□ -0.85
LIN54-202ENST00000442461 ZNF563Q8TA94 476 aa9.76□□□□□ -0.85
LIN54-202ENST00000442461 CLCC1Q96S66 551 aa9.76□□□□□ -0.85
LIN54-202ENST00000442461 CPPED1Q9BRF8 314 aaPredicted RBP9.76□□□□□ -0.85
LIN54-202ENST00000442461 NTMT1Q9BV86 223 aa9.76□□□□□ -0.85
LIN54-202ENST00000442461 FAM212BQ9NTI7 297 aaPredicted RBP9.76□□□□□ -0.85
LIN54-202ENST00000442461 SIX4Q9UIU6 781 aa9.76□□□□□ -0.85
LIN54-202ENST00000442461 BCL9LQ86UU0 1499 aa9.76□□□□□ -0.85
LIN54-202ENST00000442461 CPED1A4D0V7 1026 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms