RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 FIZ1Q96SL8 496 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 URM1Q9BTM9 101 aaKnown RBP11.4□□□□□ -0.58
UBR4-205ENST00000417040 GALNT9Q9HCQ5 603 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 TRAV27A0A087WT01 109 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 KDM4FA0A1W2PPD8 638 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 OR6C6A6NF89 314 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 PLSCR1O15162 318 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 IFNGR1P15260 489 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 MAGEA6P43360 314 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 HNRNPKP61978 463 aaKnown RBP eCLIP11.4□□□□□ -0.58
UBR4-205ENST00000417040 SORDQ00796 357 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 LEXMQ3ZCV2 418 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 OR2G6Q5TZ20 316 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 AGAP6Q5VW22 663 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 PEX11GQ96HA9 241 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 AGAP4Q96P64 663 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 VRK1Q99986 396 aaPredicted RBP11.4□□□□□ -0.58
UBR4-205ENST00000417040 CWH43Q9H720 699 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 SDR39U1Q9NRG7 319 aaPredicted RBP11.4□□□□□ -0.58
UBR4-205ENST00000417040 STARD5Q9NSY2 213 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 PIK3C2AO00443 1686 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 PROS1P07225 676 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 MAOAP21397 527 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 HLA-DMAP28067 261 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 ZNF136P52737 540 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 SHC2P98077 582 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 SF3B4Q15427 424 aaKnown RBP eCLIP11.4□□□□□ -0.588e-8■■■■■ 26.8
UBR4-205ENST00000417040 MEX3BQ6ZN04 569 aaKnown RBP11.4□□□□□ -0.58
UBR4-205ENST00000417040 LMNTD1Q8N9Z9 388 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 GOLM1Q8NBJ4 401 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 SGCZQ96LD1 299 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 SLC7A11Q9UPY5 501 aa11.4□□□□□ -0.58
UBR4-205ENST00000417040 HTR3BO95264 441 aa11.4□□□□□ -0.59
UBR4-205ENST00000417040 RAB3DO95716 219 aa11.4□□□□□ -0.59
UBR4-205ENST00000417040 IFNA1P01562 189 aa11.4□□□□□ -0.59
UBR4-205ENST00000417040 IDH3GP51553 393 aaPredicted RBP11.4□□□□□ -0.59
UBR4-205ENST00000417040 PLCXD2Q0VAA5 305 aa11.4□□□□□ -0.59
UBR4-205ENST00000417040 TDGQ13569 410 aa11.4□□□□□ -0.59
UBR4-205ENST00000417040 TSTD1Q8NFU3 115 aa11.4□□□□□ -0.59
UBR4-205ENST00000417040 NLGN4YQ8NFZ3 816 aaPredicted RBP11.4□□□□□ -0.59
UBR4-205ENST00000417040 CD200R1Q8TD46 325 aa11.4□□□□□ -0.59
UBR4-205ENST00000417040 TGM7Q96PF1 710 aa11.4□□□□□ -0.59
UBR4-205ENST00000417040 ELF4Q99607 663 aaPredicted RBP11.4□□□□□ -0.59
UBR4-205ENST00000417040 TUBB1Q9H4B7 451 aa11.4□□□□□ -0.59
UBR4-205ENST00000417040 DOK2O60496 412 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 C6P13671 934 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 CERS1P27544 350 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 DHPSP49366 369 aaPredicted RBP11.39□□□□□ -0.59
UBR4-205ENST00000417040 GPR17Q13304 367 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 ACSM3Q53FZ2 586 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 COQ5Q5HYK3 327 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 LILRB2Q8N423 598 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 OR7G1Q8NGA0 311 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 MUL1Q969V5 352 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 SDSLQ96GA7 329 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 TRIB3Q96RU7 358 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 EGLN3Q9H6Z9 239 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.39□□□□□ -0.59
UBR4-205ENST00000417040 HOXB2P14652 356 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 AHRP35869 848 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 HSD11B2P80365 405 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 NHSL2Q5HYW2 709 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 SLC18B1Q6NT16 456 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 DPY19L2P1Q6NXN4 242 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 APOOLQ6UXV4 268 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 C15orf39Q6ZRI6 1047 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 PRR22Q8IZ63 422 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 LILRA2Q8N149 483 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 SAP130Q9H0E3 1048 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 QRSL1Q9H0R6 528 aaKnown RBP11.39□□□□□ -0.59
UBR4-205ENST00000417040 NELFAQ9H3P2 528 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 RHBDD3Q9Y3P4 386 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 PRSS21Q9Y6M0 314 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 AQP9O43315 295 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 GPR32O75388 356 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 ITGAMP11215 1152 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 SYN1P17600 705 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 MC3RP41968 323 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 CRHR2Q13324 411 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 GAB1Q13480 694 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 DEFB110Q30KQ9 67 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 ZNF776Q68DI1 518 aaPredicted RBP11.39□□□□□ -0.59
UBR4-205ENST00000417040 LARP4Q71RC2 724 aaKnown RBP eCLIP11.39□□□□□ -0.59
UBR4-205ENST00000417040 OR4C15Q8NGM1 316 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 MED20Q9H944 212 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 NTN4Q9HB63 628 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 TRIM64BA6NI03 449 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 PRSS3P35030 304 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 POLR2IP36954 125 aaKnown RBP11.39□□□□□ -0.59
UBR4-205ENST00000417040 FAM69BQ5VUD6 431 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 STEAP3Q658P3 488 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 UMODL1-AS1Q8N2C9 162 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 MTMR14Q8NCE2 650 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 STEAP2Q8NFT2 490 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 HAS2Q92819 552 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 HOXB13Q92826 284 aaPredicted RBP11.39□□□□□ -0.59
UBR4-205ENST00000417040 MALSU1Q96EH3 234 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 METTL2AQ96IZ6 378 aaKnown RBP11.39□□□□□ -0.59
UBR4-205ENST00000417040 HHIPL1Q96JK4 782 aa11.39□□□□□ -0.59
UBR4-205ENST00000417040 FAM71F1Q96KD3 344 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms