RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	TSN	Q15631	228 aa	Known RBP	7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TPSAB1	Q15661	275 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	LTB4R	Q15722	352 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SGCB	Q16585	318 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SFRP5	Q5T4F7	317 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	MRM1	Q6IN84	353 aa	Known RBP	7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	LRRC8E	Q6NSJ5	796 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	VSTM4	Q8IW00	320 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	KRT78	Q8N1N4	520 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	METTL25	Q8N6Q8	603 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ANKS4B	Q8N8V4	417 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	GPATCH11	Q8N954	259 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	FADS6	Q8N9I5	356 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	OR4N2	Q8NGD1	307 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	RNF138	Q8WVD3	245 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SIGLEC10	Q96LC7	697 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SERPINB12	Q96P63	405 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SORCS2	Q96PQ0	1159 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ADO	Q96SZ5	270 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	KRTAP17-1	Q9BYP8	105 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TRIM54	Q9BYV2	358 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	BPESC1	Q9GZL8	116 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	PLAC1	Q9HBJ0	212 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	XPR1	Q9UBH6	696 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ASIC3	Q9UHC3	531 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	PLLP	Q9Y342	182 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	EMC9	Q9Y3B6	208 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	MAD1L1	Q9Y6D9	718 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	COMMD10	Q9Y6G5	202 aa		7.61	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SMAD9	O15198	467 aa	Known RBP	7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TSPAN2	O60636	221 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	REM1	O75628	298 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	LYZL6	O75951	148 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	PLG	P00747	810 aa	Predicted RBP	7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	CPM	P14384	443 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	NT5E	P21589	574 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	FUT4	P22083	530 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	FABP6	P51161	128 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	EFNA4	P52798	201 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	CORO7	P57737	925 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	RPP38	P78345	283 aa	Known RBP	7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	CHIT1	Q13231	466 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SNTA1	Q13424	505 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	STK11	Q15831	433 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	MST1L	Q2TV78	715 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	IQCC	Q4KMZ1	466 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TRMT12	Q53H54	448 aa	Known RBP	7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	DEPDC1	Q5TB30	811 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	LCE5A	Q5TCM9	118 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	LGSN	Q5TDP6	509 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	KHDRBS2	Q5VWX1	349 aa	Known RBP	7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TFAP2E	Q6VUC0	442 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	NPSR1	Q6W5P4	371 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	PEX26	Q7Z412	305 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	GALNT10	Q86SR1	603 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	CCDC25	Q86WR0	208 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	MUC15	Q8N387	334 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	STEAP2	Q8NFT2	490 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	OR4K17	Q8NGC6	315 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	OR2W6P	Q8NHA6	318 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	FAM216A	Q8WUB2	273 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	GMPPA	Q96IJ6	420 aa	Predicted RBP	7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ADGRG7	Q96K78	797 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	GBP4	Q96PP9	640 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ZNF747	Q9BV97	191 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	C1QTNF6	Q9BXI9	259 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	PRRG4	Q9BZD6	226 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ANKZF1	Q9H8Y5	726 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SMYD2	Q9NRG4	433 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	BCAP29	Q9UHQ4	241 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	PRSS50	Q9UI38	385 aa		7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	MRPS18C	Q9Y3D5	142 aa	Known RBP	7.6	□□□□□ -1.19
NIF3L1-206	ENST00000416651	UQCRHL	A0A096LP55	91 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651		A0A0A6YYD5	115 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651		C9JVG2	144 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651		H7C417	338 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ENO2	P09104	434 aa	Predicted RBP	7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	CCDC175	P0C221	793 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	NR2F6	P10588	404 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	ZNF23	P17027	643 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	NAGA	P17050	411 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	IL32	P24001	234 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SHC1	P29353	583 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	BSG	P35613	385 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	CASP2	P42575	452 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	EMD	P50402	254 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	PDLIM4	P50479	330 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	DSCR4	P56555	118 aa	Predicted RBP	7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	MRPS35	P82673	323 aa	Known RBP	7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SRSF4	Q08170	494 aa	Known RBP	7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TGM3	Q08188	693 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TBX2	Q13207	712 aa	Predicted RBP	7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TRIP10	Q15642	601 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651		Q6ZSR9	355 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	BHLHA15	Q7RTS1	189 aa	Predicted RBP	7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	C1QL4	Q86Z23	238 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	IGDCC3	Q8IVU1	814 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	TUSC5	Q8IXB3	177 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	SVOPL	Q8N434	492 aa		7.59	□□□□□ -1.19
NIF3L1-206	ENST00000416651	OR52R1	Q8NGF1	315 aa		7.59	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms