RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 KNOP1Q1ED39 458 aaKnown RBP1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 TEX30Q5JUR7 227 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 TCERG1LQ5VWI1 586 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 SLC25A25Q6KCM7 469 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 EMBQ6PCB8 327 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 B3GLCTQ6Y288 498 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 ZNF813Q6ZN06 617 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 TAF8Q7Z7C8 310 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 VSTM4Q8IW00 320 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 C9orf40Q8IXQ3 194 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 KLHL36Q8N4N3 616 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 ZNF548Q8NEK5 533 aaPredicted RBP1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 ACTRT1Q8TDG2 376 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 CNOT9Q92600 299 aaKnown RBP1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 FAR2Q96K12 515 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 FAM19A4Q96LR4 140 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 TMEM68Q96MH6 324 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 MS4A10Q96PG2 267 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 UHRF2Q96PU4 802 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 RAB11FIP5Q9BXF6 653 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 ZYG11BQ9C0D3 744 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 CXXC4Q9H2H0 198 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 LRRC19Q9H756 370 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 RGS18Q9NS28 235 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 PAK1IP1Q9NWT1 392 aaPredicted RBP1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 C6orf203Q9P0P8 240 aaPredicted RBP1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 ADAM28Q9UKQ2 775 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 RYR3Q15413 4870 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 CCDC88CQ9P219 2028 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 ADAMTS9Q9P2N4 1935 aa1.62□□□□□ -2.15
SMARCAD1-202ENST00000359052 BECN2A8MW95 431 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 PRSS46E5RG02 174 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 CYB561D2O14569 222 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 DHX15O43143 795 aaKnown RBP1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 TSPAN1O60635 241 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 TSC22D2O75157 780 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 CDH16O75309 829 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 PAK4O96013 591 aaPredicted RBP1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 MT-ATP6P00846 226 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 CD37P11049 281 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 PSMC3P17980 439 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 TBXA2RP21731 343 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 EPHA3P29320 983 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 PKLRP30613 574 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 PTGDSP41222 190 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 ZFP36L2P47974 494 aaKnown RBP1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 METAP2P50579 478 aaKnown RBP eCLIP1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 CHN2P52757 468 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 PSMC5P62195 406 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 MYBPC1Q00872 1141 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 TSPY1Q01534 308 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 PAX5Q02548 391 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 FOLH1Q04609 750 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 KPNB1Q14974 876 aaKnown RBP1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 HLA-BQ31612 363 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 EOGTQ5NDL2 527 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 MFSD14CQ5VZR4 134 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 FRG2Q64ET8 278 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 RGS7BPQ6MZT1 257 aaPredicted RBP1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 CD164L2Q6UWJ8 174 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 ARCQ7LC44 396 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 CUZD1Q86UP6 607 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 HOOK3Q86VS8 718 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 C12orf76Q8N812 135 aaPredicted RBP1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 CCDC150Q8NCX0 1101 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 C11orf45Q8TAV5 145 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 WDR20Q8TBZ3 569 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 SPPL2AQ8TCT8 520 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 SLC44A1Q8WWI5 657 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 MRPS27Q92552 414 aaKnown RBP1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 ST6GAL2Q96JF0 529 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 DCAF5Q96JK2 942 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 SMIM8Q96KF7 97 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 PANX2Q96RD6 677 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 CHRDL1Q9BU40 450 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 GEMIN7Q9H840 131 aaKnown RBP1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 ETNK2Q9NVF9 386 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 TUBA8Q9NY65 449 aaPredicted RBP1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 LGALS13Q9UHV8 139 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 MOSPD1Q9UJG1 213 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 ZNF221Q9UK13 617 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 CELSR2Q9HCU4 2923 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 IGHV3-20A0A0C4DH32 117 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 UBE2Q2LH0YL09 131 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 hCG_2039718K7EN88 272 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 CTDSPLO15194 276 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 RAD17O75943 681 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 GCP02774 474 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 RPS17P08708 135 aaKnown RBP1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 STSP08842 583 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 HLA-DOBP13765 273 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 SLC6A1P30531 599 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 HSPA2P54652 639 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 SEC61GP60059 68 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 VLDLRP98155 873 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 ZXDAP98168 799 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 E2F1Q01094 437 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 P3H1Q32P28 736 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 SLC36A3Q495N2 470 aa1.61□□□□□ -2.15
SMARCAD1-202ENST00000359052 ZNF672Q499Z4 452 aaPredicted RBP1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms