RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 SLC22A16Q86VW1 577 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 PAPD5Q8NDF8 572 aaKnown RBP11.47□□□□□ -0.57
PCF11-201ENST00000298281 OR1M1Q8NGA1 313 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 NPRL2Q8WTW4 380 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 BIRC7Q96CA5 298 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 SCLYQ96I15 445 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 KCNK6Q9Y257 313 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 J3KR12 359 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 RAB3BP20337 219 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 HTR2BP41595 481 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 ACY1Q03154 408 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 NSDHLQ15738 373 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 LMF1Q96S06 567 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 ENKD1Q9H0I2 346 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 ZBTB20Q9HC78 741 aaPredicted RBP11.47□□□□□ -0.57
PCF11-201ENST00000298281 NPIPA5A0A0B4J1W7 369 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 NPIPA7E9PJI5 369 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 H3BML4 177 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 PDLIM1O00151 329 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 RRP8O43159 456 aaKnown RBP11.47□□□□□ -0.57
PCF11-201ENST00000298281 TIMM8AO60220 97 aaPredicted RBP11.47□□□□□ -0.57
PCF11-201ENST00000298281 NPIPA8P0DM63 369 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 HAPLN1P10915 354 aaPredicted RBP11.47□□□□□ -0.57
PCF11-201ENST00000298281 CTRB1P17538 263 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 CHATP28329 748 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 HNRNPFP52597 415 aaKnown RBP11.47□□□□□ -0.57
PCF11-201ENST00000298281 HNRNPA0Q13151 305 aaKnown RBP11.47□□□□□ -0.57
PCF11-201ENST00000298281 ZNF829Q3KNS6 432 aaPredicted RBP11.47□□□□□ -0.57
PCF11-201ENST00000298281 SPANXN4Q5MJ08 99 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 CTRB2Q6GPI1 263 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 MOB1BQ7L9L4 216 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 SERPINA12Q8IW75 414 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 SGPP2Q8IWX5 399 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 SUMF2Q8NBJ7 301 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 LRCH3Q96II8 777 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 OR52B2Q96RD2 323 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 SIX2Q9NPC8 291 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 GOSR2O14653 212 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 FADS1O60427 444 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 ZNF821O75541 412 aaPredicted RBP11.46□□□□□ -0.57
PCF11-201ENST00000298281 APOC3P02656 99 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 CHRNB1P11230 501 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 RAB8AP61006 207 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 OVCH1Q7RTY7 1134 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 RNF130Q86XS8 419 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 SCCPDHQ8NBX0 429 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 ARL6Q9H0F7 186 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 C6orf47O95873 294 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 OR12D1P0DN82 309 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 MAKP20794 623 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 CD34P28906 385 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 ACVRL1P37023 503 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 SOX3P41225 446 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 NADK2Q4G0N4 442 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 SLC18B1Q6NT16 456 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 TMEM205Q6UW68 189 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 USP53Q70EK8 1073 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 CCDC74AQ96AQ1 378 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 OR51B5Q9H339 312 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 CD93Q9NPY3 652 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 ATG4BQ9Y4P1 393 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 SOD2P04179 222 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 SCGB1C2P0DMR2 95 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 RING1Q06587 406 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 INCA1Q0VD86 236 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 KLHDC10Q6PID8 442 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 GRASPQ7Z6J2 395 aaPredicted RBP11.46□□□□□ -0.57
PCF11-201ENST00000298281 ZNF541Q9H0D2 1346 aa11.46□□□□□ -0.57
PCF11-201ENST00000298281 ADAMTS4O75173 837 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 H2AFB2P0C5Z0 115 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 IL1R2P27930 398 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 RAB13P51153 203 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 FAM26DQ5JW98 314 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 DBX2Q6ZNG2 339 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 RHEBL1Q8TAI7 183 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 DPH3Q96FX2 82 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 KCNIP2Q9NS61 270 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 A0A096LPI6 279 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 PHYHO14832 338 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 PRKYO43930 277 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 PITPNBP48739 271 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 FAM46BQ96A09 425 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 ZFP57Q9NU63 452 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 SLC39A9Q9NUM3 307 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 SLC23A2Q9UGH3 650 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 RTTNQ86VV8 2226 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 CD63P08962 238 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 ACVR1BP36896 505 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 PTH2RP49190 550 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 OR51G2Q8NGK0 314 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 CNTNAP3BQ96NU0 1288 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 ZNF160Q9HCG1 818 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 WDR37Q9Y2I8 494 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 SCN3AQ9NY46 2000 aa11.46□□□□□ -0.58
PCF11-201ENST00000298281 CCDC88AQ3V6T2 1871 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 GXYLT2A0PJZ3 443 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 SERTM1A2A2V5 107 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 CD8B2A6NJW9 211 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 OR7A17O14581 309 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 ITM2AO43736 263 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms