RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 MED12Q93074 2177 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 A0A1W2PPR1 153 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 C16orf97H3BN30 126 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 TMCC2O75069 709 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 TGM6O95932 706 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 SBK3P0C264 359 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 CRYGSP22914 178 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 ATP5F1P24539 256 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 TIA1P31483 386 aaKnown RBP eCLIP16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 CORO7P57737 925 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 RPS3AP61247 264 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 DECR1Q16698 335 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 WHAMMP3Q1A5X7 153 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 UNC50Q53HI1 259 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 TEX35Q5T0J7 233 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 CLEC9AQ6UXN8 241 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 C20orf204Q6ZNR8 217 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 HOMEZQ8IX15 550 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 MMGT1Q8N4V1 131 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 FAM76AQ8TAV0 307 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 DCAKDQ8WVC6 231 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 KAT2AQ92830 837 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 CAVIN3Q969G5 261 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 EXOSC8Q96B26 276 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 C11orf24Q96F05 449 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 PIGQQ9BRB3 760 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 BDH2Q9BUT1 245 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 IQCGQ9H095 443 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 C3orf14Q9HBI5 128 aa16.1■□□□□ 0.17
SHKBP1-227ENST00000602011 MYO1GB0I1T2 1018 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 SMNDC1O75940 238 aaKnown RBP eCLIP16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 HEXAP06865 529 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 FCGR2AP12318 317 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 TSPAN8P19075 237 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 DDCP20711 480 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 EVI2BP34910 448 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 CPOXP36551 454 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 B3GALT5-AS1P59052 145 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 RAE1P78406 368 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 FAM27E3Q08E93 113 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 LCP2Q13094 533 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 ZNHIT3Q15649 155 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 ACKR1Q16570 336 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 OR5M10Q6IEU7 315 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 CNEP1R1Q8N9A8 125 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 MNS1Q8NEH6 495 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 UHMK1Q8TAS1 419 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 GFM2Q969S9 779 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 CCDC126Q96EE4 140 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 METTL2AQ96IZ6 378 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 WFIKKN1Q96NZ8 548 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 FAM111AQ96PZ2 611 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 MED18Q9BUE0 208 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 ACPTQ9BZG2 426 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 DSN1Q9H410 356 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 ZNF395Q9H8N7 513 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 Q9N2J8 555 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 FAM120CQ9NX05 1096 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 PAQR5Q9NXK6 330 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 C19orf53Q9UNZ5 99 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 AP4B1Q9Y6B7 739 aa16.09■□□□□ 0.17
SHKBP1-227ENST00000602011 EXPH5Q8NEV8 1989 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 FADS1O60427 444 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 GSTA1P08263 222 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 ANXA4P09525 319 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 POU2F1P14859 743 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 PPP3CBP16298 524 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 HK1P19367 917 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 UGT2B10P36537 528 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 KIR2DL2P43627 348 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 PRKAA2P54646 552 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 PSG6Q00889 435 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 C17orf67Q0P5P2 114 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 RAET1LQ5VY80 246 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 FAM180BQ6P0A1 224 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 NPSR1Q6W5P4 371 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 RPS27LQ71UM5 84 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 OR2M3Q8NG83 312 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 OR7G2Q8NG99 324 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 ACMSDQ8TDX5 336 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 IFT81Q8WYA0 676 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 ZNF592Q92610 1267 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 L3HYPDHQ96EM0 354 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 ZNF845Q96IR2 970 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 HBEGFQ99075 208 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 RNF122Q9H9V4 155 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 ARID1AO14497 2285 aa16.08■□□□□ 0.16
SHKBP1-227ENST00000602011 EXOC1LA0A1B0GW35 172 aa16.07■□□□□ 0.16
SHKBP1-227ENST00000602011 KIAA1324LA8MWY0 1029 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-227ENST00000602011 DLX3O60479 287 aa16.07■□□□□ 0.16
SHKBP1-227ENST00000602011 ABHD2P08910 425 aa16.07■□□□□ 0.16
SHKBP1-227ENST00000602011 ZNF763Q0D2J5 394 aa16.07■□□□□ 0.16
SHKBP1-227ENST00000602011 C2orf80Q0P641 193 aa16.07■□□□□ 0.16
SHKBP1-227ENST00000602011 PLXDC2Q6UX71 529 aa16.07■□□□□ 0.16
SHKBP1-227ENST00000602011 BTLAQ7Z6A9 289 aa16.07■□□□□ 0.16
SHKBP1-227ENST00000602011 PRIMA1Q86XR5 153 aa16.07■□□□□ 0.16
SHKBP1-227ENST00000602011 EFHD2Q96C19 240 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-227ENST00000602011 APIPQ96GX9 242 aa16.07■□□□□ 0.16
SHKBP1-227ENST00000602011 MDFIQ99750 246 aa16.07■□□□□ 0.16
SHKBP1-227ENST00000602011 MIEF1Q9NQG6 463 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 364.5 ms