RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 DPM1O60762 260 aa16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 IFNA14P01570 189 aa16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 C8orf89P0DMQ9 161 aa16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 DRD2P14416 443 aa16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 ATF4P18848 351 aaPredicted RBP16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 GGT2P36268 569 aa16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 PRKAG1P54619 331 aa16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 TRA2BP62995 288 aaKnown RBP16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 GLYR1Q49A26 553 aaPredicted RBP16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 GDPGP1Q6ZNW5 385 aa16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 ATCAYQ86WG3 371 aa16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 SFTPA2Q8IWL1 248 aa16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 SLC22A18ASQ8N1D0 253 aa16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 STX19Q8N4C7 294 aa16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 MFSD9Q8NBP5 474 aa16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 TOE1Q96GM8 510 aaKnown RBP16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 TMEM19Q96HH6 336 aa16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 AMDHD1Q96NU7 426 aa16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 BBS4Q96RK4 519 aa16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 TTYH1Q9H313 450 aaPredicted RBP16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 TCEAL2Q9H3H9 227 aaPredicted RBP16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 ASB4Q9Y574 426 aa16.02■□□□□ 0.15
SHKBP1-205ENST00000594973 COL4A2P08572 1712 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 A0A1W2PS29 197 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 GSAPA4D1B5 854 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 MAN2B1O00754 1011 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 PROM1O43490 865 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 GSTM5P46439 218 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 RORCP51449 518 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 GPR18Q14330 331 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 TAB1Q15750 504 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 OR5D16Q8NGK9 328 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 ENKURQ8TC29 256 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 ZC3HAV1LQ96H79 300 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 DCLRE1CQ96SD1 692 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 TM9SF2Q99805 663 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 ACSS1Q9NUB1 689 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 MRPL39Q9NYK5 338 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 ZMAT5Q9UDW3 170 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 SLC23A1Q9UHI7 598 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 KLF15Q9UIH9 416 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 ELF5Q9UKW6 265 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 PCOLCE2Q9UKZ9 415 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 A6NCN8 305 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 HMGN4O00479 90 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 ADAMDEC1O15204 470 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 SCO1O75880 301 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 AIFM1O95831 613 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 STSP08842 583 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 GLULP15104 373 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 POU3F3P20264 500 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 KIR2DL3P43628 341 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 SNRPD2P62316 118 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 BTN3A2P78410 334 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 ILF3Q12906 894 aaKnown RBP eCLIP16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 MAB21L1Q13394 359 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 GANABQ14697 944 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 COL19A1Q14993 1142 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 PAQR7Q86WK9 346 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 KIF18BQ86Y91 864 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 CCDC116Q8IYX3 515 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 GEMIN6Q8WXD5 167 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 KIAA1143Q96AT1 154 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 SERHL2Q9H4I8 314 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 ZCCHC3Q9NUD5 404 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 TAS2R7Q9NYW3 318 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 CMAHPQ9Y471 501 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 MDC1Q14676 2089 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 LAMA1P25391 3075 aa16.01■□□□□ 0.15
SHKBP1-205ENST00000594973 IQCMA0A1B0GVH7 501 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 OR6C74A6NCV1 312 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 ATP6V1G2-DDX39BF2Z307 99 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 TNFRSF10CO14798 259 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 IGHV4-34P06331 123 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 CFL1P23528 166 aaKnown RBP16■□□□□ 0.15
SHKBP1-205ENST00000594973 NTSP30990 170 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 FEN1P39748 380 aaKnown RBP16■□□□□ 0.15
SHKBP1-205ENST00000594973 SNRPNP63162 240 aaKnown RBP16■□□□□ 0.15
SHKBP1-205ENST00000594973 SNTA1Q13424 505 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 PLET1Q6UQ28 207 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 ZNF578Q96N58 590 aaPredicted RBP16■□□□□ 0.15
SHKBP1-205ENST00000594973 FEVQ99581 238 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 SARGQ9BW04 601 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 CDCA4Q9BXL8 241 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 ASPNQ9BXN1 380 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 C2orf42Q9NWW7 574 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 RHCGQ9UBD6 479 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 TRPC4Q9UBN4 977 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 ARHGEF17Q96PE2 2063 aaPredicted RBP16■□□□□ 0.15
SHKBP1-205ENST00000594973 OR12D1P0DN82 309 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 TNNI3P19429 210 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 STXBP1P61764 594 aaKnown RBP16■□□□□ 0.15
SHKBP1-205ENST00000594973 YPEL5P62699 121 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 DAB2P98082 770 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 ELOAQ14241 798 aaKnown RBP16■□□□□ 0.15
SHKBP1-205ENST00000594973 TATDN3Q17R31 274 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 EXOC3L2Q2M3D2 409 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 TMEM65Q6PI78 240 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 VN1R4Q7Z5H5 301 aa16■□□□□ 0.15
SHKBP1-205ENST00000594973 SREK1IP1Q8N9Q2 155 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms