RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 UGT2B28Q9BY64 529 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 MCCC2Q9HCC0 563 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 GIN1Q9NXP7 522 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 TAS2R10Q9NYW0 307 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 SH3BP4Q9P0V3 963 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 RAB21Q9UL25 225 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 EDARQ9UNE0 448 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 HCFC1P51610 2035 aa15.25■□□□□ 0.03
USB1-211ENST00000565662 A0A0G2JNJ9 132 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 PIP5K1BO14986 540 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 TYROBPO43914 113 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 NGFRP08138 427 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 LINC00032P0C843 101 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 BMP7P18075 431 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 PRPS1L1P21108 318 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 CEACAM8P31997 349 aaPredicted RBP15.24■□□□□ 0.03
USB1-211ENST00000565662 PTGDSP41222 190 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 SERPINB4P48594 390 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 OCRLQ01968 901 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 HSPB3Q12988 150 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 LSM12Q3MHD2 195 aaKnown RBP15.24■□□□□ 0.03
USB1-211ENST00000565662 FBXL19-AS1Q494R0 122 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 GLYR1Q49A26 553 aaPredicted RBP15.24■□□□□ 0.03
USB1-211ENST00000565662 XKR7Q5GH72 579 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 KIF18BQ86Y91 864 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 NUDCD3Q8IVD9 361 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 PKNOX2Q96KN3 472 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 TSSK3Q96PN8 268 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 G6PC3Q9BUM1 346 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 GALNT9Q9HCQ5 603 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 Q9UFV3 132 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 EIF3LQ9Y262 564 aaKnown RBP15.24■□□□□ 0.03
USB1-211ENST00000565662 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.24■□□□□ 0.03
USB1-211ENST00000565662 CREBBPQ92793 2442 aa15.24■□□□□ 0.03
USB1-211ENST00000565662 SCAMP2O15127 329 aaKnown RBP15.23■□□□□ 0.03
USB1-211ENST00000565662 EMC8O43402 210 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 SPAG7O75391 227 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 ERLIN1O75477 346 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 SERPINE1P05121 402 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 CHRNGP07510 517 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 BCKDHAP12694 445 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 KIR3DL1P43629 444 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 C17orf67Q0P5P2 114 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 GAB1Q13480 694 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 RFTN2Q52LD8 501 aaPredicted RBP15.23■□□□□ 0.03
USB1-211ENST00000565662 EIPR1Q53HC9 387 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 WIPI1Q5MNZ9 446 aaPredicted RBP15.23■□□□□ 0.03
USB1-211ENST00000565662 CHMP1BQ7LBR1 199 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 WDR53Q7Z5U6 358 aaPredicted RBP15.23■□□□□ 0.03
USB1-211ENST00000565662 CCDC71Q8IV32 467 aaPredicted RBP15.23■□□□□ 0.03
USB1-211ENST00000565662 RPRMLQ8N4K4 120 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 WDSUB1Q8N9V3 476 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 FNDC5Q8NAU1 212 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 HOXB13Q92826 284 aaPredicted RBP15.23■□□□□ 0.03
USB1-211ENST00000565662 EFHD2Q96C19 240 aaPredicted RBP15.23■□□□□ 0.03
USB1-211ENST00000565662 WDYHV1Q96HA8 205 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 LURAP1Q96LR2 239 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 SFXN2Q96NB2 322 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 ZNF559Q9BR84 538 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 SFXN3Q9BWM7 321 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 TBL1XR1Q9BZK7 514 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 C12orf65Q9H3J6 166 aaKnown RBP15.23■□□□□ 0.03
USB1-211ENST00000565662 TUBB1Q9H4B7 451 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 TNFRSF12AQ9NP84 129 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 SERHLQ9NQF3 203 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 ASIC5Q9NY37 505 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 SLC17A7Q9P2U7 560 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 ATP6V1HQ9UI12 483 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 FREM3P0C091 2139 aa15.23■□□□□ 0.03
USB1-211ENST00000565662 H0Y3Z8 333 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 C19orf84I3L1E1 186 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 NKX2-2O95096 273 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 CRHP06850 196 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 SNRPB2P08579 225 aaKnown RBP15.22■□□□□ 0.03
USB1-211ENST00000565662 PEPDP12955 493 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 PRF1P14222 555 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 TACR1P25103 407 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 CTSSP25774 331 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 DPP4P27487 766 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 ETV4P43268 484 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 GFRA1P56159 465 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 C21orf58P58505 322 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 SORDQ00796 357 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 TLE4Q04727 773 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 FGFBP1Q14512 234 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 CDSNQ15517 529 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.22■□□□□ 0.03
USB1-211ENST00000565662 UGT3A2Q3SY77 523 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 OR2A2Q6IF42 318 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 MEIOBQ8N635 442 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 SIMC1Q8NDZ2 872 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 NUP43Q8NFH3 380 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 OR56A1Q8NGH5 318 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 OR2T11Q8NH01 316 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 EGLN2Q96KS0 407 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 STACQ99469 402 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 PIGQQ9BRB3 760 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 MECRQ9BV79 373 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 PARD6BQ9BYG5 372 aa15.22■□□□□ 0.03
USB1-211ENST00000565662 DUSP22Q9NRW4 184 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms