RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 PODNL1Q6PEZ8 512 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 GPR141Q7Z602 305 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 PLXDC1Q8IUK5 500 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 ZNF595Q8IYB9 648 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 SPARTQ8N0X7 666 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 PARP8Q8N3A8 854 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 OR6C4Q8NGE1 309 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 OR51Q1Q8NH59 317 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 GPR151Q8TDV0 419 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 APH1BQ8WW43 257 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 RIT1Q92963 219 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 ISOC1Q96CN7 298 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 PLEKHA8Q96JA3 519 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 ARHGDIGQ99819 225 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 NEURL2Q9BR09 285 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 RHNO1Q9BSD3 238 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 ALOXE3Q9BYJ1 711 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 ZNF350Q9GZX5 532 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 MTHFD2LQ9H903 347 aaPredicted RBP8.76□□□□□ -1.01
LINC00838-201ENST00000562956 CAPN10Q9HC96 672 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 PRTFDC1Q9NRG1 225 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 DUSP22Q9NRW4 184 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 RNF6Q9Y252 685 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 TMA7Q9Y2S6 64 aaKnown RBP8.76□□□□□ -1.01
LINC00838-201ENST00000562956 VPS13AQ96RL7 3174 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 GXYLT2A0PJZ3 443 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 SYT5O00445 386 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 FAAHO00519 579 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 ABCB7O75027 752 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 OR2B3O76000 313 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 CCDC159P0C7I6 412 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 GABRA3P34903 492 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 ESRRGP62508 458 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 CSTF1Q05048 431 aaKnown RBP8.76□□□□□ -1.01
LINC00838-201ENST00000562956 MAP4K2Q12851 820 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 GRM7Q14831 915 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 RAB39AQ14964 217 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 NR1D2Q14995 579 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 GPR68Q15743 365 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 MAPK14Q16539 360 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 ZBED5Q49AG3 693 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 TMEM236Q5W0B7 351 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 NIPAL1Q6NVV3 410 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 PGBD2Q6P3X8 592 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 DHRS4L2Q6PKH6 230 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 TTLL10Q6ZVT0 673 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 KANSL1Q7Z3B3 1105 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 CROCCP3Q8IVE0 287 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 GALNT12Q8IXK2 581 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 COX18Q8N8Q8 333 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 CCDC74AQ96AQ1 378 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 RBM18Q96H35 190 aaKnown RBP8.76□□□□□ -1.01
LINC00838-201ENST00000562956 PRRC1Q96M27 445 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 FANCEQ9HB96 536 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 CUTCQ9NTM9 273 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 SLC6A14Q9UN76 642 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 MRPS33Q9Y291 106 aaKnown RBP8.76□□□□□ -1.01
LINC00838-201ENST00000562956 ZNF443Q9Y2A4 671 aaPredicted RBP8.76□□□□□ -1.01
LINC00838-201ENST00000562956 LAMTOR5O43504 91 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 HYAL3O43820 417 aaPredicted RBP8.75□□□□□ -1.01
LINC00838-201ENST00000562956 CPNE6O95741 557 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 IFI6P09912 130 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 FOLR1P15328 257 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 ALAS2P22557 587 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 EPHA8P29322 1005 aaPredicted RBP8.75□□□□□ -1.01
LINC00838-201ENST00000562956 SSTR4P31391 388 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 TRHRP34981 398 aaPredicted RBP8.75□□□□□ -1.01
LINC00838-201ENST00000562956 KRT20P35900 424 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 IDH2P48735 452 aaKnown RBP8.75□□□□□ -1.01
LINC00838-201ENST00000562956 ARL4DP49703 201 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 RNF144AP50876 292 aaPredicted RBP8.75□□□□□ -1.01
LINC00838-201ENST00000562956 NUP107P57740 925 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 SMIM11AP58511 58 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 GPLD1P80108 840 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 IGLV3-21P80748 117 aaPredicted RBP8.75□□□□□ -1.01
LINC00838-201ENST00000562956 ZNF155Q12901 538 aaPredicted RBP8.75□□□□□ -1.01
LINC00838-201ENST00000562956 PTGES3Q15185 160 aaKnown RBP8.75□□□□□ -1.01
LINC00838-201ENST00000562956 PROX2Q3B8N5 592 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 PLK5Q496M5 336 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 ZCCHC12Q6PEW1 402 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 FIGNL1Q6PIW4 674 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 ZC3H14Q6PJT7 736 aaKnown RBP8.75□□□□□ -1.01
LINC00838-201ENST00000562956 ZNF836Q6ZNA1 936 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 SNX29P2Q8IUI4 249 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 PEX5LQ8IYB4 626 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 OR1L3Q8NH93 324 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.75□□□□□ -1.01
LINC00838-201ENST00000562956 NECAB3Q96P71 396 aaPredicted RBP8.75□□□□□ -1.01
LINC00838-201ENST00000562956 STACQ99469 402 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 NUDT22Q9BRQ3 303 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 NLGN3Q9NZ94 848 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 REV1Q9UBZ9 1251 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 KCNE5Q9UJ90 142 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 SLC13A4Q9UKG4 626 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 NTNG1Q9Y2I2 539 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 MN1Q10571 1320 aaPredicted RBP8.75□□□□□ -1.01
LINC00838-201ENST00000562956 THADAQ6YHU6 1953 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 NPIPA5A0A0B4J1W7 369 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 AGAP5A6NIR3 686 aa8.75□□□□□ -1.01
LINC00838-201ENST00000562956 CPSF4LA6NMK7 179 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms