RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 TRIB1Q96RU8 372 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 FOXC2Q99958 501 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 EBPLQ9BY08 206 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 CCM2LQ9NUG4 571 aaPredicted RBP12.76□□□□□ -0.37
CCND1-204ENST00000539241 GIMAP2Q9UG22 337 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 ST6GALNAC2Q9UJ37 374 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 FOXD3Q9UJU5 478 aaPredicted RBP12.76□□□□□ -0.37
CCND1-204ENST00000539241 WBP11Q9Y2W2 641 aaKnown RBP12.76□□□□□ -0.37
CCND1-204ENST00000539241 POLR3HQ9Y535 204 aaPredicted RBP12.76□□□□□ -0.37
CCND1-204ENST00000539241 USH1CQ9Y6N9 552 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 NF1P21359 2839 aa12.76□□□□□ -0.37
CCND1-204ENST00000539241 CD8B2A6NJW9 211 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 A6NNC1 897 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 ZNF195O14628 629 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 SNPHO15079 494 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 ACOX3O15254 700 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 PEX11AO75192 247 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 TGDSO95455 350 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 CBX7O95931 251 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 CSNK2A2P19784 350 aaPredicted RBP12.75□□□□□ -0.37
CCND1-204ENST00000539241 DUSP2Q05923 314 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 PLCXD2Q0VAA5 305 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 MAD2L1Q13257 205 aaPredicted RBP12.75□□□□□ -0.37
CCND1-204ENST00000539241 DESI1Q6ICB0 168 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 SLC30A6Q6NXT4 461 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 NUP54Q7Z3B4 507 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 MAVSQ7Z434 540 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 YRDCQ86U90 279 aaKnown RBP12.75□□□□□ -0.37
CCND1-204ENST00000539241 FNDC5Q8NAU1 212 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 FAM83FQ8NEG4 500 aaPredicted RBP12.75□□□□□ -0.37
CCND1-204ENST00000539241 ADCY4Q8NFM4 1077 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 OR52R1Q8NGF1 315 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 C16orf78Q8WTQ4 265 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 KLHL29Q96CT2 875 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 RMND5BQ96G75 393 aaPredicted RBP12.75□□□□□ -0.37
CCND1-204ENST00000539241 LCORQ96JN0 433 aaPredicted RBP12.75□□□□□ -0.37
CCND1-204ENST00000539241 NODALQ96S42 347 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 FAIM2Q9BWQ8 316 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 OSBPL11Q9BXB4 747 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 CXXC4Q9H2H0 198 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 LIME1Q9H400 295 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 AKTIPQ9H8T0 292 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 GALNT9Q9HCQ5 603 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 MYNNQ9NPC7 610 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 FAM53CQ9NYF3 392 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 PRODH2Q9UF12 536 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 ZNF639Q9UID6 485 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 PSME2Q9UL46 239 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 DLGAP4Q9Y2H0 992 aa12.75□□□□□ -0.37
CCND1-204ENST00000539241 MBD3L4A6NDZ8 208 aaPredicted RBP12.74□□□□□ -0.37
CCND1-204ENST00000539241 MBD3L3A6NE82 208 aaPredicted RBP12.74□□□□□ -0.37
CCND1-204ENST00000539241 MBD3L5A6NJ08 208 aaPredicted RBP12.74□□□□□ -0.37
CCND1-204ENST00000539241 ICOSLGO75144 302 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 IL3P08700 152 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 PCSK2P16519 638 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 SDC1P18827 310 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 TACR1P25103 407 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 CTSSP25774 331 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 GCKP35557 465 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 SOX18P35713 384 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 PTGDSP41222 190 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 ALDH9A1P49189 494 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 DCAF7P61962 342 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 EMX2Q04743 252 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 LTB4RQ15722 352 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 TRMT12Q53H54 448 aaKnown RBP12.74□□□□□ -0.37
CCND1-204ENST00000539241 OGFOD2Q6N063 350 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 FAM180BQ6P0A1 224 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 EPGNQ6UW88 154 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 IKBIPQ70UQ0 350 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 LARP4Q71RC2 724 aaKnown RBP eCLIP12.74□□□□□ -0.37
CCND1-204ENST00000539241 CDC20BQ86Y33 519 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 SIMC1Q8NDZ2 872 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 GOT1L1Q8NHS2 421 aaPredicted RBP12.74□□□□□ -0.37
CCND1-204ENST00000539241 MBD3L2Q8NHZ7 208 aaPredicted RBP12.74□□□□□ -0.37
CCND1-204ENST00000539241 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.74□□□□□ -0.37
CCND1-204ENST00000539241 CTHRC1Q96CG8 243 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 CNRIP1Q96F85 164 aaPredicted RBP12.74□□□□□ -0.37
CCND1-204ENST00000539241 MAELQ96JY0 434 aaKnown RBP12.74□□□□□ -0.37
CCND1-204ENST00000539241 SIKE1Q9BRV8 207 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 CALHM2Q9HA72 323 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 ASIC5Q9NY37 505 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 NOP53Q9NZM5 478 aaKnown RBP12.74□□□□□ -0.37
CCND1-204ENST00000539241 EHD3Q9NZN3 535 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 KLRF1Q9NZS2 232 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 CBLCQ9ULV8 474 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 MAPRE3Q9UPY8 281 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 EIF3LQ9Y262 564 aaKnown RBP12.74□□□□□ -0.37
CCND1-204ENST00000539241 PLEKHA6Q9Y2H5 1048 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 ZNF780BQ9Y6R6 833 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 PRRC2AP48634 2157 aaKnown RBP12.74□□□□□ -0.37
CCND1-204ENST00000539241 NCKAP5O14513 1909 aa12.74□□□□□ -0.37
CCND1-204ENST00000539241 ABCA4P78363 2273 aa12.73□□□□□ -0.37
CCND1-204ENST00000539241 ZNF469Q96JG9 3925 aaPredicted RBP12.73□□□□□ -0.37
CCND1-204ENST00000539241 C2orf72A6NCS6 295 aa12.73□□□□□ -0.37
CCND1-204ENST00000539241 PRAMEF25A6NGN4 478 aa12.73□□□□□ -0.37
CCND1-204ENST00000539241 EEF1E1-BLOC1S5C9J1V9 151 aa12.73□□□□□ -0.37
CCND1-204ENST00000539241 EEF1E1O43324 174 aaKnown RBP12.73□□□□□ -0.37
CCND1-204ENST00000539241 DIAPH2O60879 1101 aa12.73□□□□□ -0.37
CCND1-204ENST00000539241 UGT2B11O75310 529 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms