RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 GATA6Q92908 595 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 CHFRQ96EP1 664 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 RNH1P13489 461 aaKnown RBP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 SYN1P17600 705 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 RAB3AP20336 220 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 GRIN2CQ14957 1233 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 NNATQ16517 81 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 C1QTNF12Q5T7M4 302 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 ZC3H14Q6PJT7 736 aaKnown RBP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 SPRYD4Q8WW59 207 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 ARHGAP9Q9BRR9 750 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 PTGDR2Q9Y5Y4 395 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 OR5K4A6NMS3 321 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 LYRM1O43325 122 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 ALDOAP04075 364 aaKnown RBP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 CLDN8P56748 225 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 NKX3-2P78367 333 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 ZNF33BQ06732 778 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 DEFB134Q4QY38 66 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 TSPYL5Q86VY4 417 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 SLC35F3Q8IY50 421 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 TRMT10AQ8TBZ6 339 aaKnown RBP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 FKBP10Q96AY3 582 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 ZBED3Q96IU2 234 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 F2RL3Q96RI0 385 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 ATXN7L1Q9ULK2 861 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 COCHO43405 550 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 S1PR4O95977 384 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 ALDOBP05062 364 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 DUSP3P51452 185 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 CYCSP99999 105 aaKnown RBP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 NFATC4Q14934 902 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 TCEAL1Q15170 157 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 PGAP1Q75T13 922 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 MOB1BQ7L9L4 216 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 THAP3Q8WTV1 239 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 ZNF689Q96CS4 500 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-208ENST00000538570 LRIG1Q96JA1 1093 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 WDR92Q96MX6 357 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 BCL7BQ9BQE9 202 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 PDE7BQ9NP56 450 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 B3GALT1Q9Y5Z6 326 aa9.45□□□□□ -0.9
COL4A6-208ENST00000538570 MDFIC2A0A1B0GVS7 189 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 FEZF1A0PJY2 475 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 ZNF701M0R085 212 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-208ENST00000538570 JRKO75564 520 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 ADAP00813 363 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 RPS26P62854 115 aaKnown RBP9.44□□□□□ -0.9
COL4A6-208ENST00000538570 EMC10Q5UCC4 262 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 KIAA0319Q5VV43 1072 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 PLBD1Q6P4A8 553 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 ZFP82Q8N141 532 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 SVBPQ8N300 66 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 CSNK1A1LQ8N752 337 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 PAPD5Q8NDF8 572 aaKnown RBP9.44□□□□□ -0.9
COL4A6-208ENST00000538570 ST7LQ8TDW4 575 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 DDIT4LQ96D03 193 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 TMEM100Q9NV29 134 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 CYP8B1Q9UNU6 501 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 CEPT1Q9Y6K0 416 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 SHPRHQ149N8 1683 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 RPS10-NUDT3A0A1W2PQS6 291 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 UBFD1O14562 309 aaKnown RBP9.44□□□□□ -0.9
COL4A6-208ENST00000538570 ANKRD28O15084 1053 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 FGF18O76093 207 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 CDK1P06493 297 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 PBX2P40425 430 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 RPS10P46783 165 aaKnown RBP9.44□□□□□ -0.9
COL4A6-208ENST00000538570 TAS2R38P59533 333 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 COQ5Q5HYK3 327 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 LCN8Q6JVE9 175 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 PIWIL3Q7Z3Z3 882 aaKnown RBP9.44□□□□□ -0.9
COL4A6-208ENST00000538570 IL17RCQ8NAC3 791 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 HINT2Q9BX68 163 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 KCNK12Q9HB15 430 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 GLTPQ9NZD2 209 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 ACAD8Q9UKU7 415 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 NAALAD2Q9Y3Q0 740 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 PTBP3O95758 552 aaKnown RBP9.44□□□□□ -0.9
COL4A6-208ENST00000538570 SOD2P04179 222 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 SLC35E2BP0CK96 405 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 CDKN2DP55273 166 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 ZNF280AP59817 542 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-208ENST00000538570 DOC2AQ14183 400 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 MAMDC2Q7Z304 686 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-208ENST00000538570 SYT14Q8NB59 555 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 CPT1CQ8TCG5 803 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 ADAMTS18Q8TE60 1221 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 SCAMP4Q969E2 229 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 POU2F3Q9UKI9 436 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 F5H5P2 479 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 TOR1AO14656 332 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 SHOXO15266 292 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 MT-CO2P00403 227 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 LMAN2Q12907 356 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 CEACAM7Q14002 265 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 FIGNL1Q6PIW4 674 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 RFPL4BQ6ZWI9 263 aa9.44□□□□□ -0.9
COL4A6-208ENST00000538570 GPR149Q86SP6 731 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms