RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 KLF9Q13886 244 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 TRADDQ15628 312 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 ETFDHQ16134 617 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 ZNF260Q3ZCT1 412 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 FGD3Q5JSP0 725 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 DLEU7Q6UYE1 221 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 RAD9BQ6WBX8 426 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 ASPGQ86U10 573 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 THEM5Q8N1Q8 247 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 CCDC112Q8NEF3 446 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 OR11H4Q8NGC9 324 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 OR10Q1Q8NGQ4 319 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 OR13C3Q8NGS6 347 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 OR2T34Q8NGX1 318 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 SPPL2BQ8TCT7 592 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 ZNF473Q8WTR7 871 aaKnown RBP4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 METTL21AQ8WXB1 218 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 C18orf25Q96B23 403 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 OTUB2Q96DC9 234 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 DTD2Q96FN9 168 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 C17orf77Q96MU5 243 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 SORCS2Q96PQ0 1159 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 DUX5Q96PT3 197 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 BTBD9Q96Q07 612 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 OMDQ99983 421 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 TCHPQ9BT92 498 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 SCAND2PQ9GZW5 306 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 ILKAPQ9H0C8 392 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 DPH5Q9H2P9 285 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 MARCH7Q9H992 704 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 OCIAD1Q9NX40 245 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 FBXL12Q9NXK8 326 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 THAP10Q9P2Z0 257 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 SPASTQ9UBP0 616 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 DNPEPQ9ULA0 475 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 KCNS2Q9ULS6 477 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 PLEKHA6Q9Y2H5 1048 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 MRPS18BQ9Y676 258 aaKnown RBP4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 ZANQ9Y493 2812 aa4.21□□□□□ -1.74
HMGB1P23-201ENST00000518743 DYSFO75923 2080 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 LOC101059948A0A1B0GTJ6 334 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 RGSL1A5PLK6 1076 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 C5orf60A6NFR6 353 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 CHEK1O14757 476 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 XPNPEP2O43895 674 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 CACNG3O60359 315 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 CTSVO60911 334 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 NME6O75414 186 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 CRLF1O75462 422 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 GIMD1P0DJR0 217 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 ODC1P11926 461 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 CCL4P13236 92 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 HLA-DOBP13765 273 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 CYP3A5P20815 502 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 ALDH4A1P30038 563 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 ACAA2P42765 397 aaKnown RBP4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 NR0B1P51843 470 aaKnown RBP4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 HNRNPFP52597 415 aaKnown RBP4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 SMSP52788 366 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 CLDN17P56750 224 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 CSNK1G2P78368 415 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 CCL7P80098 99 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 LGALS3BPQ08380 585 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 OVGP1Q12889 678 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 SCGB2A2Q13296 93 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 CHRNA6Q15825 494 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 DCAF4L1Q3SXM0 396 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 ZNF776Q68DI1 518 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 RAET1GQ6H3X3 334 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 ZNF770Q6IQ21 691 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 NCCRP1Q6ZVX7 275 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 ANO5Q75V66 913 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 TMEM135Q86UB9 458 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 BBS7Q8IWZ6 715 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 RCOR2Q8IZ40 523 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 FBXW8Q8N3Y1 598 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 Q8N9G6 341 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 DENND6BQ8NEG7 585 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 OR10T2Q8NGX3 314 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 RNASE8Q8TDE3 154 aaKnown RBP4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 LMX1AQ8TE12 382 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 C2orf15Q8WU43 125 aaKnown RBP4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 ALG14Q96F25 216 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 EPSTI1Q96J88 318 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 SECISBP2Q96T21 854 aaKnown RBP4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 PRMT1Q99873 361 aaKnown RBP4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 SSX3Q99909 188 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 TMEM204Q9BSN7 226 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 C19orf24Q9BVV8 132 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 CCDC94Q9BW85 323 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 TEKT3Q9BXF9 490 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 RAB17Q9H0T7 212 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 VIPAS39Q9H9C1 493 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 RBM28Q9NW13 759 aaKnown RBP4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 CA5BQ9Y2D0 317 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 MRPS2Q9Y399 296 aaKnown RBP4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 IKBKGQ9Y6K9 419 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 TCHHQ07283 1943 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 SEC16AO15027 2179 aa4.2□□□□□ -1.74
HMGB1P23-201ENST00000518743 TRGV8A0A0C4DH27 118 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms