RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 HBMQ6B0K9 141 aa12.93□□□□□ -0.34
NPHP4-207ENST00000470763 KLHL36Q8N4N3 616 aa12.93□□□□□ -0.34
NPHP4-207ENST00000470763 TEX47Q8TBZ9 253 aa12.93□□□□□ -0.34
NPHP4-207ENST00000470763 PTP4A1Q93096 173 aa12.93□□□□□ -0.34
NPHP4-207ENST00000470763 CXorf40BQ96DE9 158 aa12.93□□□□□ -0.34
NPHP4-207ENST00000470763 ZNF354BQ96LW1 612 aa12.93□□□□□ -0.34
NPHP4-207ENST00000470763 SMG9Q9H0W8 520 aaKnown RBP12.93□□□□□ -0.34
NPHP4-207ENST00000470763 KLHL1Q9NR64 748 aa12.93□□□□□ -0.34
NPHP4-207ENST00000470763 KIF25Q9UIL4 384 aa12.93□□□□□ -0.34
NPHP4-207ENST00000470763 POMT2Q9UKY4 750 aa12.93□□□□□ -0.34
NPHP4-207ENST00000470763 COLQQ9Y215 455 aaPredicted RBP12.93□□□□□ -0.34
NPHP4-207ENST00000470763 SIRT4Q9Y6E7 314 aaPredicted RBP12.93□□□□□ -0.34
NPHP4-207ENST00000470763 A0A0B4J203 849 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 AGAP14A8MT82 685 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 EFCAB14O75071 495 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 HOXC8P31273 242 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 MMP12P39900 470 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 RPS7P62081 194 aaKnown RBP12.92□□□□□ -0.34
NPHP4-207ENST00000470763 SP140Q13342 867 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 SLC30A6Q6NXT4 461 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 SLC27A4Q6P1M0 643 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 ATRAIDQ6UW56 229 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 TFAP2EQ6VUC0 442 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 CHST9Q7L1S5 443 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 APCDD1Q8J025 514 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 ADAMTS14Q8WXS8 1223 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 ACOT12Q8WYK0 555 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 FUZQ9BT04 418 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 SARGQ9BW04 601 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 TAAR2Q9P1P5 351 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 FZD7O75084 574 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 MPC1LP0DKB6 136 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 ATP1B2P14415 290 aaPredicted RBP12.92□□□□□ -0.34
NPHP4-207ENST00000470763 B2MP61769 119 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 ZNF33BQ06732 778 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 HSPB3Q12988 150 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 SYPL1Q16563 259 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 MED27Q6P2C8 311 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 RPLP0P6Q8NHW5 317 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 TRMT10AQ8TBZ6 339 aaKnown RBP12.92□□□□□ -0.34
NPHP4-207ENST00000470763 FOPNLQ96NB1 174 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 SLC38A2Q96QD8 506 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 ABCG4Q9H172 646 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 MAN2C1Q9NTJ4 1040 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 MRPS18AQ9NVS2 196 aaKnown RBP12.92□□□□□ -0.34
NPHP4-207ENST00000470763 CFAP97Q9P2B7 532 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 ATPIF1Q9UII2 106 aa12.92□□□□□ -0.34
NPHP4-207ENST00000470763 SLC38A8A6NNN8 435 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 SLC28A2O43868 658 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 KLHL18O94889 574 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 CXCL2P19875 107 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 PTNP21246 168 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 THBS2P35442 1172 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 RFX3P48380 749 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 KCNJ5P48544 419 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 PDE7AQ13946 482 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 SLC25A35Q3KQZ1 300 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 SFRP4Q6FHJ7 346 aaPredicted RBP12.91□□□□□ -0.34
NPHP4-207ENST00000470763 FAM71E1Q6IPT2 247 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 Q6ZTK2 550 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 YIPF5Q969M3 257 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 ZNF416Q9BWM5 594 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 FBXL2Q9UKC9 423 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 SLC9B1P1A6NJY1 282 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 WNT1P04628 370 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 UQCRC2P22695 453 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 PTSQ03393 145 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 PUS10Q3MIT2 529 aaKnown RBP12.91□□□□□ -0.34
NPHP4-207ENST00000470763 SFXN4Q6P4A7 337 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 PRSS45Q7RTY3 260 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 WDR89Q96FK6 387 aaPredicted RBP12.91□□□□□ -0.34
NPHP4-207ENST00000470763 FCRL4Q96PJ5 515 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 FERD3LQ96RJ6 166 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 GPR62Q9BZJ7 368 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 LDAHQ9H6V9 325 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 KCNK12Q9HB15 430 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 CBLCQ9ULV8 474 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 CHST2Q9Y4C5 530 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 RNF215Q9Y6U7 377 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 NUMA1Q14980 2115 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 PRRC2BQ5JSZ5 2229 aaKnown RBP12.91□□□□□ -0.34
NPHP4-207ENST00000470763 RGS9O75916 674 aaPredicted RBP12.91□□□□□ -0.34
NPHP4-207ENST00000470763 NMBP08949 121 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 ACP5P13686 325 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 XPAP23025 273 aaPredicted RBP12.91□□□□□ -0.34
NPHP4-207ENST00000470763 IMPA1P29218 277 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 SIM1P81133 766 aaPredicted RBP12.91□□□□□ -0.34
NPHP4-207ENST00000470763 SLBPQ14493 270 aaKnown RBP eCLIP12.91□□□□□ -0.34
NPHP4-207ENST00000470763 RGS7BPQ6MZT1 257 aaPredicted RBP12.91□□□□□ -0.34
NPHP4-207ENST00000470763 IZUMO1Q8IYV9 350 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 OR5D16Q8NGK9 328 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 COPS3Q9UNS2 423 aa12.91□□□□□ -0.34
NPHP4-207ENST00000470763 IRGMA1A4Y4 181 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 L7N2F9 121 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 CHST10O43529 356 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 RNF13O43567 381 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 UBXN7O94888 489 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 APOC3P02656 99 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 NPR2P20594 1047 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 TBXA2RP21731 343 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms