RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 PRPS2P11908 318 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 FCGR2AP12318 317 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 CDH1P12830 882 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 LYL1P12980 280 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 EPORP19235 508 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 GPX3P22352 226 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 CXCR2P25025 360 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 AK4P27144 223 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 ACADLP28330 430 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 CMPK1P30085 196 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 PKLRP30613 574 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 SHMT2P34897 504 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 HPCAL1P37235 193 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 ACADVLP49748 655 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 RAB28P51157 221 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 BLKP51451 505 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 RAP1GDS1P52306 607 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 POLR2JP52435 117 aaKnown RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 CLNS1AP54105 237 aaKnown RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 GAS1P54826 345 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 SRP54P61011 504 aaKnown RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 ELF3P78545 371 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 RPL36AP83881 106 aaKnown RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 EMX2Q04743 252 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZNF33BQ06732 778 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 ACSM2AQ08AH3 577 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 DOC2AQ14183 400 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 RBBP5Q15291 538 aaKnown RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 SHBQ15464 509 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 RPE65Q16518 533 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 ALG11Q2TAA5 492 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 SMU1Q2TAY7 513 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 TRMT5Q32P41 509 aaKnown RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 UGT3A2Q3SY77 523 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 PLK5Q496M5 336 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 GXYLT1Q4G148 440 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZNF658BQ4V348 819 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 SPIN4Q56A73 249 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 C6orf136Q5SQH8 315 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 C10orf62Q5T681 223 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 IL23RQ5VWK5 629 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 ATG9BQ674R7 924 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 ACSM2BQ68CK6 577 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 PRMT9Q6P2P2 845 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 MTFR2Q6P444 385 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 CYP20A1Q6UW02 462 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC36A4Q6YBV0 504 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 Q6ZSR6 202 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 NET1Q7Z628 596 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 ARPINQ7Z6K5 226 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 ABI3BPQ7Z7G0 1075 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 C17orf64Q86WR6 236 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZFAND4Q86XD8 727 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC44A2Q8IWA5 706 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 DSELQ8IZU8 1212 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 SFRP1Q8N474 314 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 LIX1Q8N485 282 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 SPEM1Q8N4L4 309 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 C2orf73Q8N5S3 287 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 L3MBTL4Q8NA19 623 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR52E1Q8NGJ3 308 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR9I1Q8NGQ6 314 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR2T11Q8NH01 316 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR14A16Q8NHC5 309 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 RLN3Q8WXF3 142 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 SMPDL3AQ92484 453 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 TMEM131Q92545 1883 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 NEIL2Q969S2 332 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 TSACCQ96A04 125 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 ROPN1LQ96C74 230 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 BIRC7Q96CA5 298 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 CCDC124Q96CT7 223 aaKnown RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 SPDL1Q96EA4 605 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 CMTM7Q96FZ5 175 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 BMFQ96LC9 184 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 GFM1Q96RP9 751 aaKnown RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 NPAS2Q99743 824 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 AIF1LQ9BQI0 150 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 CENPKQ9BS16 269 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 ACAT2Q9BWD1 397 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 EBPLQ9BY08 206 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 CADM1Q9BY67 442 aaKnown RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 ACPTQ9BZG2 426 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 EHD1Q9H4M9 534 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 WDR41Q9HAD4 459 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 PELI2Q9HAT8 420 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 BRF2Q9HAW0 419 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 MYO10Q9HD67 2058 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 Q9N2J8 555 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 FARSBQ9NSD9 589 aaKnown RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 GID8Q9NWU2 228 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 NMRK1Q9NWW6 199 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 WSB2Q9NYS7 404 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 TAS2R1Q9NYW7 299 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 ADA2Q9NZK5 511 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC23A2Q9UGH3 650 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 APOBEC3BQ9UH17 382 aaKnown RBP3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 BCAP29Q9UHQ4 241 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 MUTYHQ9UIF7 546 aa3.57□□□□□ -1.84
HMGB3P20-201ENST00000417997 LEF1Q9UJU2 399 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms