RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 TRAM2Q15035 370 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 PON3Q15166 354 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 KCTD18Q6PI47 426 aaPredicted RBP7.03□□□□□ -1.28
SH3D19-203ENST00000409598 FIGNL1Q6PIW4 674 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 MRPL21Q7Z2W9 205 aaKnown RBP7.03□□□□□ -1.28
SH3D19-203ENST00000409598 SPRED2Q7Z698 418 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 OR8H2Q8N162 312 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 SGTBQ96EQ0 304 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 BORCS8Q96FH0 119 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 DGCR6LQ9BY27 220 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 EHD1Q9H4M9 534 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 TMEM185BQ9H7F4 350 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 REV1Q9UBZ9 1251 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 ANKRD31Q8N7Z5 1873 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 ANKRD30BLA7E2S9 258 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 C11orf98E9PRG8 122 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 NADKO95544 446 aaPredicted RBP7.03□□□□□ -1.28
SH3D19-203ENST00000409598 C9P02748 559 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 ANXA2P07355 339 aaKnown RBP7.03□□□□□ -1.28
SH3D19-203ENST00000409598 SLC35E2BP0CK96 405 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 SLC35E2P0CK97 266 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 THBS2P35442 1172 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 SNRPD2P62316 118 aaKnown RBP7.03□□□□□ -1.28
SH3D19-203ENST00000409598 TNFRSF17Q02223 184 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 GAB1Q13480 694 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 ZNF846Q147U1 533 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 NADK2Q4G0N4 442 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 SLC22A25Q6T423 547 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 PTCHD4Q6ZW05 846 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 BNIPLQ7Z465 357 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 NAGSQ8N159 534 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 ABHD11Q8NFV4 315 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 OR52P1PQ8NH57 321 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 GCDHQ92947 438 aaPredicted RBP7.03□□□□□ -1.28
SH3D19-203ENST00000409598 DHRS1Q96LJ7 313 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 C7orf26Q96N11 449 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 ACTR6Q9GZN1 396 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 C6orf62Q9GZU0 229 aaPredicted RBP7.03□□□□□ -1.28
SH3D19-203ENST00000409598 SMURF1Q9HCE7 757 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 LYRM4Q9HD34 91 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 NANSQ9NR45 359 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 FBXO9Q9UK97 447 aaPredicted RBP7.03□□□□□ -1.28
SH3D19-203ENST00000409598 F5P12259 2224 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 ZNF670-ZNF695F2Z2N8 137 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 SERPINA1P01009 418 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 CRYAAP02489 173 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 MYF5P13349 255 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 ZNF12P17014 697 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 PSMB9P28065 219 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 RCVRNP35243 200 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 ARSDP51689 593 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 VHLLQ6RSH7 139 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 GALNT5Q7Z7M9 940 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 TIGD4Q8IY51 512 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 B3GNT7Q8NFL0 401 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 FNDC8Q8TC99 324 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 TMEM171Q8WVE6 324 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 CHID1Q9BWS9 393 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 DMRT3Q9NQL9 472 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 EHD3Q9NZN3 535 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 ZNF346Q9UL40 294 aaKnown RBP7.03□□□□□ -1.28
SH3D19-203ENST00000409598 MYO7AQ13402 2215 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 FAM25AB3EWG3 89 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 FAM25CB3EWG5 89 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 FAM25GB3EWG6 89 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 FMO6PO60774 539 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 FAM155BO75949 473 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 H6PDO95479 791 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 PRSS56P0CW18 603 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 MYH6P13533 1939 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 CCR7P32248 378 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 WDR4P57081 412 aaKnown RBP7.03□□□□□ -1.28
SH3D19-203ENST00000409598 CFHR1Q03591 330 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 SLC10A2Q12908 348 aaPredicted RBP7.03□□□□□ -1.28
SH3D19-203ENST00000409598 CHAF1BQ13112 559 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 KCNAB2Q13303 367 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 KCNJ8Q15842 424 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 TECPR1Q7Z6L1 1165 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 LMNTD1Q8N9Z9 388 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 SETD6Q8TBK2 473 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 LIN37Q96GY3 246 aaPredicted RBP7.03□□□□□ -1.28
SH3D19-203ENST00000409598 ESRP2Q9H6T0 727 aaKnown RBP7.03□□□□□ -1.28
SH3D19-203ENST00000409598 CALHM2Q9HA72 323 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 MARCH4Q9P2E8 410 aaPredicted RBP7.03□□□□□ -1.28
SH3D19-203ENST00000409598 PCDHB14Q9Y5E9 798 aa7.03□□□□□ -1.28
SH3D19-203ENST00000409598 GPC6Q9Y625 555 aaPredicted RBP7.03□□□□□ -1.28
SH3D19-203ENST00000409598 PDLIM1O00151 329 aa7.02□□□□□ -1.29
SH3D19-203ENST00000409598 RGS5O15539 181 aa7.02□□□□□ -1.29
SH3D19-203ENST00000409598 LDB3O75112 727 aa7.02□□□□□ -1.29
SH3D19-203ENST00000409598 H1F0P07305 194 aaKnown RBP7.02□□□□□ -1.29
SH3D19-203ENST00000409598 SLC36A2Q495M3 483 aa7.02□□□□□ -1.29
SH3D19-203ENST00000409598 SMARCD3Q6STE5 483 aa7.02□□□□□ -1.29
SH3D19-203ENST00000409598 CPNE8Q86YQ8 564 aa7.02□□□□□ -1.29
SH3D19-203ENST00000409598 CNTD1Q8N815 330 aa7.02□□□□□ -1.29
SH3D19-203ENST00000409598 TP53I13Q8NBR0 393 aaPredicted RBP7.02□□□□□ -1.29
SH3D19-203ENST00000409598 C16orf78Q8WTQ4 265 aa7.02□□□□□ -1.29
SH3D19-203ENST00000409598 ASB11Q8WXH4 323 aa7.02□□□□□ -1.29
SH3D19-203ENST00000409598 MYDGFQ969H8 173 aa7.02□□□□□ -1.29
SH3D19-203ENST00000409598 ROPN1LQ96C74 230 aa7.02□□□□□ -1.29
SH3D19-203ENST00000409598 COPS4Q9BT78 406 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms