RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 G6PC3Q9BUM1 346 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 FAF1Q9UNN5 650 aaPredicted RBP16.94■□□□□ 0.3
CHTOP-202ENST00000368687 WIF1Q9Y5W5 379 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 USH1CQ9Y6N9 552 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 TRGV5A0A0B4J1U4 118 aa16.93■□□□□ 0.3
CHTOP-202ENST00000368687 CCL21O00585 134 aa16.93■□□□□ 0.3
CHTOP-202ENST00000368687 ANKRD28O15084 1053 aa16.93■□□□□ 0.3
CHTOP-202ENST00000368687 CBR3O75828 277 aa16.93■□□□□ 0.3
CHTOP-202ENST00000368687 C6orf47O95873 294 aa16.93■□□□□ 0.3
CHTOP-202ENST00000368687 S100A3P33764 101 aa16.93■□□□□ 0.3
CHTOP-202ENST00000368687 TP53BP2Q13625 1128 aa16.93■□□□□ 0.3
CHTOP-202ENST00000368687 BICRALQ6AI39 1079 aa16.93■□□□□ 0.3
CHTOP-202ENST00000368687 ANGPTL8Q6UXH0 198 aa16.93■□□□□ 0.3
CHTOP-202ENST00000368687 ARFGAP2Q8N6H7 521 aa16.93■□□□□ 0.3
CHTOP-202ENST00000368687 JADE3Q92613 823 aa16.93■□□□□ 0.3
CHTOP-202ENST00000368687 EFHD2Q96C19 240 aaPredicted RBP16.93■□□□□ 0.3
CHTOP-202ENST00000368687 ACTRT3Q9BYD9 372 aa16.93■□□□□ 0.3
CHTOP-202ENST00000368687 UBQLN3Q9H347 655 aa16.93■□□□□ 0.3
CHTOP-202ENST00000368687 TP63Q9H3D4 680 aaPredicted RBP16.93■□□□□ 0.3
CHTOP-202ENST00000368687 WDR55Q9H6Y2 383 aaPredicted RBP16.93■□□□□ 0.3
CHTOP-202ENST00000368687 EXO5Q9H790 373 aa16.93■□□□□ 0.3
CHTOP-202ENST00000368687 GOLGA8QA0A0J9YX86 632 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 GOLGA8OA6NCC3 632 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 DUXAA6NLW8 204 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 FIGNL2A6NMB9 653 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 E9PLN8 166 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 GOLGA8NF8WBI6 632 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 UBDO15205 165 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 POLR3GO15318 223 aaPredicted RBP16.92■□□□□ 0.3
CHTOP-202ENST00000368687 DIAPH2O60879 1101 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 PDE9AO76083 593 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 HMGN2P05204 90 aaKnown RBP16.92■□□□□ 0.3
CHTOP-202ENST00000368687 HPNP05981 417 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 TPOP07202 933 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 NGFRP08138 427 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 ALDOCP09972 364 aaKnown RBP16.92■□□□□ 0.3
CHTOP-202ENST00000368687 HBA1P69905 142 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 HSF1Q00613 529 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 C3AR1Q16581 482 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.92■□□□□ 0.3
CHTOP-202ENST00000368687 PDCD4Q53EL6 469 aaKnown RBP16.92■□□□□ 0.3
CHTOP-202ENST00000368687 OR4F3Q6IEY1 312 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 CDC73Q6P1J9 531 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 CHERPQ8IWX8 916 aaKnown RBP16.92■□□□□ 0.3
CHTOP-202ENST00000368687 TRIML2Q8N7C3 387 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 COX18Q8N8Q8 333 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 OR4N2Q8NGD1 307 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 NEIL3Q8TAT5 605 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 PHF10Q8WUB8 498 aaKnown RBP16.92■□□□□ 0.3
CHTOP-202ENST00000368687 CKAP2Q8WWK9 683 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 STON2Q8WXE9 905 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 RMND5BQ96G75 393 aaPredicted RBP16.92■□□□□ 0.3
CHTOP-202ENST00000368687 VKORC1Q9BQB6 163 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 SIKE1Q9BRV8 207 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 BTBD2Q9BX70 525 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 PIGUQ9H490 435 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 MED4Q9NPJ6 270 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 ZIM2Q9NZV7 527 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 TINAGQ9UJW2 476 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 GPR45Q9Y5Y3 372 aa16.92■□□□□ 0.3
CHTOP-202ENST00000368687 ZNF195O14628 629 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 NME6O75414 186 aaPredicted RBP16.91■□□□□ 0.3
CHTOP-202ENST00000368687 AGR2O95994 175 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 IL6P05231 212 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 HOXD4P09016 255 aaPredicted RBP16.91■□□□□ 0.3
CHTOP-202ENST00000368687 RFPL3SP0C7P2 107 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 CYP4B1P13584 511 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 EFNA1P20827 205 aaPredicted RBP16.91■□□□□ 0.3
CHTOP-202ENST00000368687 AGAP20933 346 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 PTPN6P29350 595 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 SOAT1P35610 550 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 PTGDSP41222 190 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 SMSP52788 366 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 TXNL4AP83876 142 aaKnown RBP16.91■□□□□ 0.3
CHTOP-202ENST00000368687 LASP1Q14847 261 aaKnown RBP16.91■□□□□ 0.3
CHTOP-202ENST00000368687 SF3B4Q15427 424 aaKnown RBP eCLIP16.91■□□□□ 0.3
CHTOP-202ENST00000368687 FAM174BQ3ZCQ3 159 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 EXOSC6Q5RKV6 272 aaKnown RBP16.91■□□□□ 0.3
CHTOP-202ENST00000368687 WLSQ5T9L3 541 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 FNDC7Q5VTL7 733 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 TMEM211Q6ICI0 200 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 EPGNQ6UW88 154 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 CD163Q86VB7 1156 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 DOLPP1Q86YN1 238 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 PLCZ1Q86YW0 608 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 SLC16A11Q8NCK7 471 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 OR4A15Q8NGL6 344 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 ADAMTS15Q8TE58 950 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 GNRHR2Q96P88 292 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 CXorf36Q9H7Y0 433 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 GALNT9Q9HCQ5 603 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 SDR39U1Q9NRG7 319 aaPredicted RBP16.91■□□□□ 0.3
CHTOP-202ENST00000368687 BTNL2Q9UIR0 455 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 MEMO1Q9Y316 297 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 FREM3P0C091 2139 aa16.91■□□□□ 0.3
CHTOP-202ENST00000368687 NCKAP5O14513 1909 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 ICE1Q9Y2F5 2266 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 ATP8B1O43520 1251 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 WDR1O75083 606 aa16.9■□□□□ 0.3
CHTOP-202ENST00000368687 SLC22A3O75751 556 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms