RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 CT45A9P0DMV2 189 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 CT45A2Q5DJT8 189 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 AP1ARQ63HQ0 302 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 GALNT5Q7Z7M9 940 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 ZNF619Q8N2I2 560 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 RMND5BQ96G75 393 aaPredicted RBP19.67■□□□□ 0.74
VRK2-201ENST00000340157 TGIF2Q9GZN2 237 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 NMNAT1Q9HAN9 279 aaPredicted RBP19.67■□□□□ 0.74
VRK2-201ENST00000340157 FAM118AQ9NWS6 357 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 MKL2Q9ULH7 1088 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 PEX12O00623 359 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 BRINP1O60477 761 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 TPST2O60704 377 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 GADD45GO95257 159 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 DDAH2O95865 285 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 AK1P00568 194 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 ZNF806P0C7X5 589 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 FGF5P12034 268 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 TNNI3P19429 210 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 NKAIN1Q4KMZ8 207 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 ZNF836Q6ZNA1 936 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 SHISA6Q6ZSJ9 500 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 STT3BQ8TCJ2 826 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 GIPC3Q8TF64 312 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 CLIP3Q96DZ5 547 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 ITPAQ9BY32 194 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 SLC9A8Q9Y2E8 581 aa19.67■□□□□ 0.74
VRK2-201ENST00000340157 TRBV4-1A0A0J9YWV2 114 aa19.66■□□□□ 0.74
VRK2-201ENST00000340157 CCL4P13236 92 aa19.66■□□□□ 0.74
VRK2-201ENST00000340157 CSTF2P33240 577 aaKnown RBP eCLIP19.66■□□□□ 0.74
VRK2-201ENST00000340157 SLC37A1P57057 533 aa19.66■□□□□ 0.74
VRK2-201ENST00000340157 EEF1A1P68104 462 aaKnown RBP19.66■□□□□ 0.74
VRK2-201ENST00000340157 PIN1Q13526 163 aaPredicted RBP19.66■□□□□ 0.74
VRK2-201ENST00000340157 NSDHLQ15738 373 aa19.66■□□□□ 0.74
VRK2-201ENST00000340157 MICAQ29983 383 aa19.66■□□□□ 0.74
VRK2-201ENST00000340157 LCN10Q6JVE6 187 aa19.66■□□□□ 0.74
VRK2-201ENST00000340157 PEX5LQ8IYB4 626 aa19.66■□□□□ 0.74
VRK2-201ENST00000340157 SLC5A8Q8N695 610 aa19.66■□□□□ 0.74
VRK2-201ENST00000340157 OR10G2Q8NGC3 310 aa19.66■□□□□ 0.74
VRK2-201ENST00000340157 PHF10Q8WUB8 498 aaKnown RBP19.66■□□□□ 0.74
VRK2-201ENST00000340157 PMEPA1Q969W9 287 aa19.66■□□□□ 0.74
VRK2-201ENST00000340157 FEVQ99581 238 aa19.66■□□□□ 0.74
VRK2-201ENST00000340157 PRR14Q9BWN1 585 aa19.66■□□□□ 0.74
VRK2-201ENST00000340157 C3orf18Q9UK00 162 aa19.66■□□□□ 0.74
VRK2-201ENST00000340157 ONECUT2O95948 504 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 IGKV3-11P04433 115 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 FOXD4Q12950 439 aaPredicted RBP19.65■□□□□ 0.74
VRK2-201ENST00000340157 ELAVL1Q15717 326 aaKnown RBP19.65■□□□□ 0.74
VRK2-201ENST00000340157 NNATQ16517 81 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 TMEM154Q6P9G4 183 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 LANCL3Q6ZV70 420 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 ATG16L2Q8NAA4 619 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 AGBL5Q8NDL9 886 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 OR9Q2Q8NGE9 314 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 ZNF721Q8TF20 911 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 FUZQ9BT04 418 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 CBFA2T3O75081 653 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 CNOT3O75175 753 aaKnown RBP19.65■□□□□ 0.74
VRK2-201ENST00000340157 UGT2B17O75795 530 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 THBS1P07996 1170 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 ZGLP1P0C6A0 271 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 TRHRP34981 398 aaPredicted RBP19.65■□□□□ 0.74
VRK2-201ENST00000340157 PLAURQ03405 335 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 IL11RAQ14626 422 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 SEC23BQ15437 767 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 ZNHIT3Q15649 155 aaPredicted RBP19.65■□□□□ 0.74
VRK2-201ENST00000340157 RFX4Q33E94 735 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 COLEC12Q5KU26 742 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 ZNF770Q6IQ21 691 aaPredicted RBP19.65■□□□□ 0.74
VRK2-201ENST00000340157 AMER2Q8N7J2 671 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 PLPP5Q8NEB5 264 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 PIK3C3Q8NEB9 887 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 OR7G1Q8NGA0 311 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 SLC2A12Q8TD20 617 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 MUS81Q96NY9 551 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 ALPK1Q96QP1 1244 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 MESP1Q9BRJ9 268 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 MAN2C1Q9NTJ4 1040 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 IFT52Q9Y366 437 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 PCDHGA8Q9Y5G5 932 aa19.65■□□□□ 0.74
VRK2-201ENST00000340157 PRKNO60260 465 aaPredicted RBP19.64■□□□□ 0.73
VRK2-201ENST00000340157 ZNF28P17035 718 aa19.64■□□□□ 0.73
VRK2-201ENST00000340157 ELAVL4P26378 380 aaKnown RBP19.64■□□□□ 0.73
VRK2-201ENST00000340157 RAD23AP54725 363 aa19.64■□□□□ 0.73
VRK2-201ENST00000340157 DCDP81605 110 aaKnown RBP19.64■□□□□ 0.73
VRK2-201ENST00000340157 EPS8Q12929 822 aa19.64■□□□□ 0.73
VRK2-201ENST00000340157 PSD2Q9BQI7 771 aa19.64■□□□□ 0.73
VRK2-201ENST00000340157 OR8D2Q9GZM6 311 aa19.64■□□□□ 0.73
VRK2-201ENST00000340157 AKIRIN1Q9H9L7 192 aaPredicted RBP19.64■□□□□ 0.73
VRK2-201ENST00000340157 POLE3Q9NRF9 147 aa19.64■□□□□ 0.73
VRK2-201ENST00000340157 KIF17Q9P2E2 1029 aa19.64■□□□□ 0.73
VRK2-201ENST00000340157 BCAS1O75363 584 aaPredicted RBP19.63■□□□□ 0.73
VRK2-201ENST00000340157 SOX30O94993 753 aa19.63■□□□□ 0.73
VRK2-201ENST00000340157 H1F0P07305 194 aaKnown RBP19.63■□□□□ 0.73
VRK2-201ENST00000340157 IL7RP16871 459 aa19.63■□□□□ 0.73
VRK2-201ENST00000340157 EPHA2P29317 976 aa19.63■□□□□ 0.73
VRK2-201ENST00000340157 RNF144AP50876 292 aaPredicted RBP19.63■□□□□ 0.73
VRK2-201ENST00000340157 NUBP1P53384 320 aa19.63■□□□□ 0.73
VRK2-201ENST00000340157 HOXC5Q00444 222 aa19.63■□□□□ 0.73
VRK2-201ENST00000340157 KRT80Q6KB66 452 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms