RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Ap2s1P62743 142 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Ptpn2Q06180 406 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Pde12Q3TIU4 608 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Zp1Q62005 623 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Hs3st2Q673U1 367 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Slc6a7Q6PGE7 637 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 TifaQ793I8 184 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Zbtb26Q8C8S0 451 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Vmn1r6Q8R2D4 303 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Tmem185bQ8R3R5 350 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 DutQ8VCG1 200 aaKnown RBP14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Sh3bp4Q921I6 962 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Macrod1Q922B1 323 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Dhrs1Q99L04 313 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Wdr6Q99ME2 1125 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 NepnQ9CQ76 512 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 TrirQ9D735 173 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Sacm1lQ9EP69 587 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Vmn1r29Q9EQ41 303 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 CtszQ9WUU7 306 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Prss56F2YMG0 604 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gstm6O35660 218 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Brd7O88665 651 aaKnown RBP14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 OtcP11725 354 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Six5P70178 719 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 4930438A08RikQ5SPH3 536 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Sat2Q6P8J2 170 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Fam210aQ8BGY7 273 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Vmn1r234Q8R298 329 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Sapcd1Q9CY86 146 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Naa10Q9QY36 235 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Nrxn2E9Q7X7 1710 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr1303A2AVW1 312 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Alkal1J3QPP8 127 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Pias3O54714 628 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 P01673 111 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Emp1P47801 160 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Acss3Q14DH7 682 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Secisbp2Q3U1C4 858 aaKnown RBP14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Amer3Q6NS69 780 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Heatr6Q6P1G0 1184 aaKnown RBP14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Vmn2r81Q80Z09 865 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Cyp51a1Q8K0C4 503 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Pcdhga12Q91XY7 932 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Ptges3lQ9D9A7 131 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Emx1Q04742 257 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 UnklQ5FWH2 727 aaKnown RBP14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Cbx5Q61686 191 aaKnown RBP14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Lamp3Q7TST5 411 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Pum2Q80U58 1066 aaKnown RBP14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Slc7a6Q8BGK6 515 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Ctdsp2Q8BX07 270 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 MINDY3Q9CV28 444 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Med31Q9CXU1 131 aaKnown RBP14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 UgdhO70475 493 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 CrxosQ3UL53 246 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm8332Q3UTA4 144 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Cyp1b1Q64429 543 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 WdcpQ6NV72 663 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Znf182Q6P560 627 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 9130023H24RikQ8BG98 337 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfm2Q8BM13 448 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Med17Q8VCD5 649 aaKnown RBP14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Uqcrc1Q9CZ13 480 aaKnown RBP14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 NaxdQ9CZ42 343 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Grb14Q9JLM9 538 aa14.75□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Fpr-s1O08790 351 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Nat3P50296 290 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 GlaP51569 419 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Nxpe2Q3U095 558 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Fut10Q5F2L2 481 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 SctrQ5FWI2 447 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Znf235Q61116 645 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Cdkl3Q8BLF2 595 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 EfhbQ8CDU5 853 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Tmem35aQ9D328 167 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Zfp646Q6NV66 1788 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Vmn1r31L7N2F1 303 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Ccrl2O35457 360 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 CtssO70370 340 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Tm9sf4Q8BH24 643 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Rbm45Q8BHN5 476 aaKnown RBP14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Leng9Q8BTN6 485 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Fate1Q8CEK7 99 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr686Q8VGX3 317 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Trpv4Q9EPK8 871 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Hapln2Q9ESM3 341 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Cd14P10810 366 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Laptm5Q61168 261 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Lrrn1Q61809 716 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Il20raQ6PHB0 546 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Tmem150cQ8C8S3 249 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gas2l1Q8JZP9 678 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Hipk2Q9QZR5 1196 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Zfp981A2A8V7 445 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm266A6H634 200 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm21904A8HG57 180 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm21866J3QMH4 180 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Cx3cl1O35188 395 aa14.74□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Apoc3P33622 99 aa14.74□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms