RNA–Protein interactions for RNA: ENSMUST00000099937.4

Ccdc58-201, Transcript of Coiled-coil domain-containing protein 58, mousemouse

TSL 3 BASIC

Gene Ccdc58, Length 747 nt, Biotype protein coding, Subcellular localisation Axon, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58-201ENSMUST00000099937 Usp39Q3TIX9 564 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Crtc2Q3U182 692 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Znf488Q5HZG9 337 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Lasp1Q61792 263 aaKnown RBP12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Ffar4Q7TMA4 361 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Spaca9Q7TPM5 168 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 JamlQ80UL9 379 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 4930503B20RikQ80ZP0 234 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Pcyt1bQ811Q9 369 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Zfp52Q8BJ45 724 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Ugt2b35Q8BJL9 529 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Frmd6Q8C0V9 622 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Pi4k2bQ8CBQ5 469 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Q8CEZ4 452 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Slc35b4Q8CIA5 331 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 TrhdeQ8K093 1025 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Pcdhga11Q91XY8 933 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Steap4Q923B6 470 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Q99KU6 348 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Stpg1Q9D2F5 341 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Asb12Q9D738 308 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Shisa5Q9D7I0 235 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 P33monoxQ9DBN4 303 aa12.51□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Tnip3A0A1D5RMN0 279 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Samt3A2ARK7 233 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 BC035947B2RQY6 695 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Smok3aC0HKC8 504 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Smok3bC0HKC9 504 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Cd209fD3Z1H5 274 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Vmn1r31L7N2F1 303 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Suv39h1O54864 412 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 P01795 144 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 UmpsP13439 481 aaKnown RBP12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Wnt3P17553 355 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 SftpcP21841 193 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 RxrbP28704 520 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Ptpn6P29351 595 aaKnown RBP12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Ppm1bP36993 390 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 S100bP50114 92 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 C1qaP98086 245 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Map3k8Q07174 467 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Tex11Q14AT2 947 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Abraxas2Q3TCJ1 415 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 C1rlQ3UZ09 482 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 ItgadQ3V0T4 1168 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Mup20Q5FW60 181 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Trav6-2Q5R1I4 113 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Exosc3Q7TQK4 274 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 2610318N02RikQ80VT5 305 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Mab21L3Q8CI17 429 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 MepeQ8K4L6 441 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Ntmt1Q8R2U4 223 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Olfr829Q8VGX1 321 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Sfxn2Q925N2 322 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Oosp1Q925U0 202 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Nup37Q9CWU9 326 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Ddx47Q9CWX9 455 aaKnown RBP12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Shmt2Q9CZN7 504 aaKnown RBP12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Ifrd2Q9D8U0 441 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Slc46a3Q9DC26 460 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Hapln2Q9ESM3 341 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Lgi1Q9JIA1 557 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Kcnj10Q9JM63 379 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Plekhb1Q9QYE9 243 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 SpastQ9QYY8 614 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Tyk2Q9R117 1184 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Rps6ka2Q9WUT3 733 aa12.5□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Cd300ld4A2A7W1 245 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Tarm1B6A8R8 288 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Rnf165E9QAU8 347 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Slc16a5G5E8K6 468 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 CckarO08786 436 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 P01667 111 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Gap43P06837 227 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 VtnP29788 478 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Pax7P47239 503 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Hrh3P58406 445 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Cct5P80316 541 aaKnown RBP12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Ccl21aP84444 133 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Ccl21bP86792 133 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Ccl21cP86793 133 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Col10a1Q05306 680 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Treml2Q2LA85 329 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 PilraQ2YFS3 302 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Q3KNL4 93 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Ankmy2Q3TPE9 440 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Pag1Q3U1F9 429 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Trpc1Q61056 793 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Tmem158Q6F5E0 286 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Cd300ld3Q6SJQ5 245 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 LcorQ6ZPI3 433 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Syt16Q7TN83 639 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Plekhm1Q7TSI1 1074 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Ddhd2Q80Y98 699 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Pld4Q8BG07 503 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Rnf38Q8BI21 518 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Lhfpl6Q8BM86 200 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Mterf4Q8BVN4 346 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Fam131aQ8BWU3 361 aa12.49□□□□□ -0.41
Ccdc58-201ENSMUST00000099937 Phf21bQ8C966 487 aa12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 64.5 ms