RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 C1orf50Q9BV19 199 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 OSBPL11Q9BXB4 747 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 ACSS1Q9NUB1 689 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 RAP2CQ9Y3L5 183 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 FAM215AQ9Y5M1 114 aa16.88■□□□□ 0.29
SHKBP1-202ENST00000593764 PKDREJQ9NTG1 2253 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 SCAMP2O15127 329 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 TRAPPC6AO75865 159 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 CLDN14O95500 239 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 MYZAPP0CAP1 466 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 GRK2P25098 689 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 ELAVL4P26378 380 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 MAPK1P28482 360 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 MAP3K8P41279 467 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 SLC1A6P48664 564 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 GAS1P54826 345 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 MANFP55145 182 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 WDR4P57081 412 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 NUP107P57740 925 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 PMPCAQ10713 525 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 EFR3AQ14156 821 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 PTGR1Q14914 329 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 CYP27C1Q4G0S4 372 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 WLSQ5T9L3 541 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 R3HCC1LQ7Z5L2 792 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 FNDC5Q8NAU1 212 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 OR7A2PQ8NGA2 310 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 EFHD2Q96C19 240 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 SDCCAG3Q96C92 435 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 TUBGCP3Q96CW5 907 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 LMF2Q9BU23 707 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 KLRF1Q9NZS2 232 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 HAO1Q9UJM8 370 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 OR10H1Q9Y4A9 318 aa16.87■□□□□ 0.29
SHKBP1-202ENST00000593764 TEX15Q9BXT5 2789 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 NUP214P35658 2090 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 B4DXG7 233 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 ERLIN1O75477 346 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 LAMP1P11279 417 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 PRPS2P11908 318 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 EFNA1P20827 205 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 IL12BP29460 328 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 KRT20P35900 424 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 RPL14P50914 215 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 CRYZQ08257 329 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 EIPR1Q53HC9 387 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 RIMKLAQ8IXN7 391 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 KRTCAP2Q8N6L1 136 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 ZFP28Q8NHY6 868 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 GIMAP5Q96F15 307 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 TIMP4Q99727 224 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 TTYH2Q9BSA4 534 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 CBLCQ9ULV8 474 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 MAPRE3Q9UPY8 281 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 RNF6Q9Y252 685 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 PCDHGB3Q9Y5G1 929 aa16.86■□□□□ 0.29
SHKBP1-202ENST00000593764 TMEM120BA0PK00 339 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 FIGNL2A6NMB9 653 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 WDR1O75083 606 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 SNUPNO95149 360 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 G6PDP11413 515 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 CYP4B1P13584 511 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 GPC1P35052 558 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 HPCAL1P37235 193 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 EMX2Q04743 252 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 STX3Q13277 289 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 MLC1Q15049 377 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 PDCD2Q16342 344 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 VASNQ6EMK4 673 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 ANKRD42Q8N9B4 389 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 FAM83FQ8NEG4 500 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 NUP43Q8NFH3 380 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 RND1Q92730 232 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 TLCD1Q96CP7 247 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 COQ8BQ96D53 544 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 PPP1R36Q96LQ0 422 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 PAIP2Q9BPZ3 127 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 AKTIPQ9H8T0 292 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 TMBIM4Q9HC24 238 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 Q9N2J8 555 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 CHST11Q9NPF2 352 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 EQTNQ9NQ60 294 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 SERHLQ9NQF3 203 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 SIRT3Q9NTG7 399 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 COQ3Q9NZJ6 369 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 FLRT3Q9NZU0 649 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 SLC6A5Q9Y345 797 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 WIF1Q9Y5W5 379 aa16.85■□□□□ 0.29
SHKBP1-202ENST00000593764 C15orf38-AP3S2A0A0A6YYH1 394 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 GXYLT2A0PJZ3 443 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 C19orf84I3L1E1 186 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 FADS1O60427 444 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 CBR3O75828 277 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 IL33O95760 270 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 HOXD4P09016 255 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 GLI4P10075 376 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 GABRA3P34903 492 aa16.84■□□□□ 0.29
SHKBP1-202ENST00000593764 PRKAG1P54619 331 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms