RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 ATOH8Q96SQ7 321 aa4.39□□□□□ -1.71
ERCC1-216ENST00000592444 TUBA1CQ9BQE3 449 aa4.39□□□□□ -1.71
ERCC1-216ENST00000592444 ZCCHC4Q9H5U6 513 aa4.39□□□□□ -1.71
ERCC1-216ENST00000592444 ZMAT3Q9HA38 289 aaKnown RBP4.39□□□□□ -1.71
ERCC1-216ENST00000592444 BEX1Q9HBH7 125 aa4.39□□□□□ -1.71
ERCC1-216ENST00000592444 POPDC3Q9HBV1 291 aa4.39□□□□□ -1.71
ERCC1-216ENST00000592444 FBXO6Q9NRD1 293 aaPredicted RBP4.39□□□□□ -1.71
ERCC1-216ENST00000592444 IARS2Q9NSE4 1012 aaKnown RBP4.39□□□□□ -1.71
ERCC1-216ENST00000592444 SACM1LQ9NTJ5 587 aa4.39□□□□□ -1.71
ERCC1-216ENST00000592444 CATSPERZQ9NTU4 200 aa4.39□□□□□ -1.71
ERCC1-216ENST00000592444 INTS7Q9NVH2 962 aaKnown RBP4.39□□□□□ -1.71
ERCC1-216ENST00000592444 NSMCE4AQ9NXX6 385 aa4.39□□□□□ -1.71
ERCC1-216ENST00000592444 KLHL42Q9P2K6 505 aa4.39□□□□□ -1.71
ERCC1-216ENST00000592444 SLC17A7Q9P2U7 560 aa4.39□□□□□ -1.71
ERCC1-216ENST00000592444 PLAGL1Q9UM63 463 aa4.39□□□□□ -1.71
ERCC1-216ENST00000592444 TDRKHQ9Y2W6 561 aaKnown RBP4.39□□□□□ -1.71
ERCC1-216ENST00000592444 YARS2Q9Y2Z4 477 aaKnown RBP4.39□□□□□ -1.71
ERCC1-216ENST00000592444 PLLPQ9Y342 182 aa4.39□□□□□ -1.71
ERCC1-216ENST00000592444 GRIP1Q9Y3R0 1128 aa4.39□□□□□ -1.71
ERCC1-216ENST00000592444 ATG4BQ9Y4P1 393 aa4.39□□□□□ -1.71
ERCC1-216ENST00000592444 TRBV11-1A0A0K0K1C0 115 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 LOC390937A0A1W2PQ73 354 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 GOLGA6L10A6NI86 522 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 POC1B-GALNT4F8VUJ3 575 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 H7C417 338 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 ZNF195O14628 629 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 KLF11O14901 512 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 CD3EAPO15446 510 aaKnown RBP4.38□□□□□ -1.71
ERCC1-216ENST00000592444 PHGDHO43175 533 aaKnown RBP4.38□□□□□ -1.71
ERCC1-216ENST00000592444 RAMP1O60894 148 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 NIPSNAP2O75323 286 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 GPC4O75487 556 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 REM1O75628 298 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 CDC123O75794 336 aaPredicted RBP4.38□□□□□ -1.71
ERCC1-216ENST00000592444 OR2J2O76002 312 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 P04436 131 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 SLC35E2P0CK97 266 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 CCL3P10147 92 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 ERGP11308 486 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 UGT1A6P19224 532 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 TAC1P20366 129 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 CA4P22748 312 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 PDHA2P29803 388 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 RPA3P35244 121 aaPredicted RBP4.38□□□□□ -1.71
ERCC1-216ENST00000592444 SOX3P41225 446 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 XCR1P46094 333 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 SERPINB8P50452 374 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 CHN2P52757 468 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 PNLIPRP1P54315 467 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 SIRPAP78324 504 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 PHC1P78364 1004 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 RHAGQ02094 409 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 ITKQ08881 620 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 CCNIQ14094 377 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 E2F2Q14209 437 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 EXOC3L2Q2M3D2 409 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 HKDC1Q2TB90 917 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 BCL7AQ4VC05 210 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 GRTP1Q5TC63 336 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 MROH9Q5TGP6 573 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 HECTD2Q5U5R9 776 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 FAM151BQ6UXP7 276 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 RTL4Q6ZR62 310 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 MTERF4Q7Z6M4 381 aaKnown RBP4.38□□□□□ -1.71
ERCC1-216ENST00000592444 STRA8Q7Z7C7 330 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 LCA5Q86VQ0 697 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 SERPINA9Q86WD7 417 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 PALM2Q8IXS6 379 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 KLHDC8AQ8IYD2 350 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 LILRA2Q8N149 483 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 C4orf33Q8N1A6 199 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 LRRC25Q8N386 305 aaPredicted RBP4.38□□□□□ -1.71
ERCC1-216ENST00000592444 OR51Q1Q8NH59 317 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 CALML6Q8TD86 181 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 TFGQ92734 400 aaPredicted RBP4.38□□□□□ -1.71
ERCC1-216ENST00000592444 SLC25A28Q96A46 364 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 TMEM186Q96B77 213 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 PHF21AQ96BD5 680 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 PDLIM5Q96HC4 596 aaKnown RBP4.38□□□□□ -1.71
ERCC1-216ENST00000592444 LINC00615Q96LM1 132 aaPredicted RBP4.38□□□□□ -1.71
ERCC1-216ENST00000592444 C20orf173Q96LM9 149 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 SNX18Q96RF0 628 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 SORT1Q99523 831 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 TACO1Q9BSH4 297 aaKnown RBP4.38□□□□□ -1.71
ERCC1-216ENST00000592444 C1QTNF3Q9BXJ4 246 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 UGT2B28Q9BY64 529 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 C20orf27Q9GZN8 174 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 DRC3Q9H069 523 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 OR52A5Q9H2C5 316 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 CAB39LQ9H9S4 337 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 LPAR2Q9HBW0 351 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 TCF7L1Q9HCS4 588 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 BPIFA1Q9NP55 256 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 CBLN4Q9NTU7 201 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 C20orf96Q9NUD7 363 aaPredicted RBP4.38□□□□□ -1.71
ERCC1-216ENST00000592444 HAUS2Q9NVX0 235 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 GPATCH2Q9NW75 528 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 QPCTLQ9NXS2 382 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 TMEM216Q9P0N5 145 aa4.38□□□□□ -1.71
ERCC1-216ENST00000592444 SAMD15Q9P1V8 674 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms