RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 PMS2CLQ68D20 193 aa8.77□□□□□ -1
LINC00838-201ENST00000562956 TYW3Q6IPR3 259 aaKnown RBP8.77□□□□□ -1
LINC00838-201ENST00000562956 GATAD2AQ86YP4 633 aa8.77□□□□□ -1
LINC00838-201ENST00000562956 CENPSQ8N2Z9 138 aa8.77□□□□□ -1
LINC00838-201ENST00000562956 SLC7A13Q8TCU3 470 aa8.77□□□□□ -1
LINC00838-201ENST00000562956 PIK3R3Q92569 461 aa8.77□□□□□ -1
LINC00838-201ENST00000562956 C12orf43Q96C57 262 aaKnown RBP8.77□□□□□ -1
LINC00838-201ENST00000562956 CD180Q99467 661 aa8.77□□□□□ -1
LINC00838-201ENST00000562956 FUZQ9BT04 418 aa8.77□□□□□ -1
LINC00838-201ENST00000562956 CHRNA10Q9GZZ6 450 aa8.77□□□□□ -1
LINC00838-201ENST00000562956 PIGUQ9H490 435 aa8.77□□□□□ -1
LINC00838-201ENST00000562956 ZNF556Q9HAH1 456 aa8.77□□□□□ -1
LINC00838-201ENST00000562956 CTPS2Q9NRF8 586 aa8.77□□□□□ -1
LINC00838-201ENST00000562956 SACM1LQ9NTJ5 587 aa8.77□□□□□ -1
LINC00838-201ENST00000562956 HSPE1-MOB4S4R3N1 261 aa8.77□□□□□ -1
LINC00838-201ENST00000562956 CENPVL1A0A0U1RR11 272 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 FITM1A5D6W6 292 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 ARRDC5A6NEK1 342 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 CLDN24A6NM45 220 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 PTGES3LE9PB15 166 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 H3BMH7 237 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 OR10H2O60403 315 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 ANGPTL1O95841 491 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 CBX7O95931 251 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 CD1CP29017 333 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 ARRB1P49407 418 aaPredicted RBP8.77□□□□□ -1.01
LINC00838-201ENST00000562956 MAD2L1BPQ15013 274 aaPredicted RBP8.77□□□□□ -1.01
LINC00838-201ENST00000562956 SMN1Q16637 294 aaKnown RBP8.77□□□□□ -1.01
LINC00838-201ENST00000562956 TCTE1Q5JU00 501 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 DCST1Q5T197 706 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 GARNL3Q5VVW2 1013 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 BORAQ6PGQ7 559 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 KLHL17Q6TDP4 642 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 WDR5BQ86VZ2 330 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 ENTHD1Q8IYW4 607 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 NLGN4XQ8N0W4 816 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 VWA5B2Q8N398 1253 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 CLIP4Q8N3C7 705 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 OR52P1PQ8NH57 321 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 PPP1R14BQ96C90 147 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 SDF2Q99470 211 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 POLR1BQ9H9Y6 1135 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 PRMT8Q9NR22 394 aaPredicted RBP8.77□□□□□ -1.01
LINC00838-201ENST00000562956 MAN2C1Q9NTJ4 1040 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 FBXO34Q9NWN3 711 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 TMCC3Q9ULS5 477 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 WDR45Q9Y484 360 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 CLDN16Q9Y5I7 305 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 MAU2Q9Y6X3 613 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 CEP192Q8TEP8 1941 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 HRKO00198 91 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 DUX1O43812 170 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 CBFA2T3O75081 653 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 UGT2B17O75795 530 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 SLITRK5O94991 958 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 ATE1O95260 518 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 ALOX5P09917 674 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 GNSP15586 552 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 MAOAP21397 527 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 S1PR1P21453 382 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 RCVRNP35243 200 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 BCAP31P51572 246 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 SKP1P63208 163 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 HSD11B2P80365 405 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 LSM11P83369 360 aaKnown RBP eCLIP8.77□□□□□ -1.01
LINC00838-201ENST00000562956 HOXC5Q00444 222 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 NEDD8Q15843 81 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 INAVAQ3KP66 663 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 PRAMEF17Q5VTA0 474 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 GPR107Q5VW38 600 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 DCDC5Q6ZRR9 648 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 MAML2Q8IZL2 1156 aaPredicted RBP8.77□□□□□ -1.01
LINC00838-201ENST00000562956 CDRT4Q8N9R6 151 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 OR52R1Q8NGF1 315 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 C17orf50Q8WW18 174 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 ZNF566Q969W8 418 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 FNDC11Q9BVV2 318 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 NAA50Q9GZZ1 169 aaKnown RBP8.77□□□□□ -1.01
LINC00838-201ENST00000562956 CXorf21Q9HAI6 301 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 TBCCD1Q9NVR7 557 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 PILRBQ9UKJ0 227 aa8.77□□□□□ -1.01
LINC00838-201ENST00000562956 CACNA1IQ9P0X4 2223 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 A0A1W2PRQ8 180 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 TMEM150CB9EJG8 249 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 OR10H3O60404 316 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 CTNSO60931 367 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 WBP4O75554 376 aaKnown RBP8.76□□□□□ -1.01
LINC00838-201ENST00000562956 PRKAR1BP31321 381 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 GGT2P36268 569 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 MAP3K8P41279 467 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 GPR3P46089 330 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 AVPR1BP47901 424 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 GABARAPL2P60520 117 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 STX4Q12846 297 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 ITGADQ13349 1161 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 TOP3AQ13472 1001 aaPredicted RBP8.76□□□□□ -1.01
LINC00838-201ENST00000562956 DGCR6Q14129 220 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 DCST2Q5T1A1 773 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 BROXQ5VW32 411 aa8.76□□□□□ -1.01
LINC00838-201ENST00000562956 XAF1Q6GPH4 301 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms