RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 IRF9Q00978 393 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 SNTB1Q13884 538 aaKnown RBP5.51□□□□□ -1.53
CPSF7-219ENST00000539952 GBX1Q14549 363 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 SEMA3AQ14563 771 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 RPS6KA2Q15349 733 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 SF3B4Q15427 424 aaKnown RBP eCLIP5.51□□□□□ -1.531e-9■■■■■ 29.1
CPSF7-219ENST00000539952 ATP6AP1Q15904 470 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 NRF1Q16656 503 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 FBXL19-AS1Q494R0 122 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 CCDC92Q53HC0 331 aaPredicted RBP5.51□□□□□ -1.53
CPSF7-219ENST00000539952 C1orf185Q5T7R7 199 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 RTL6Q6ICC9 239 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 CAPN13Q6MZZ7 669 aaPredicted RBP5.51□□□□□ -1.53
CPSF7-219ENST00000539952 ALKBH2Q6NS38 261 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 C16orf87Q6PH81 154 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 QSOX2Q6ZRP7 698 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 GK5Q6ZS86 529 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 LARP4Q71RC2 724 aaKnown RBP eCLIP5.51□□□□□ -1.53
CPSF7-219ENST00000539952 TRILQ7L0X0 811 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 MDGA2Q7Z553 956 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 VN1R4Q7Z5H5 301 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 ASPGQ86U10 573 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 PLD3Q8IV08 490 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 LRRC56Q8IYG6 542 aaPredicted RBP5.51□□□□□ -1.53
CPSF7-219ENST00000539952 MIER2Q8N344 545 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 SNX31Q8N9S9 440 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 PSD4Q8NDX1 1056 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 NFAM1Q8NET5 270 aaPredicted RBP5.51□□□□□ -1.53
CPSF7-219ENST00000539952 OR5M9Q8NGP3 310 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 RHEBL1Q8TAI7 183 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 GIPC3Q8TF64 312 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 RAB2BQ8WUD1 216 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 ZNF480Q8WV37 535 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 KCTD4Q8WVF5 259 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 RNASE6Q93091 150 aaKnown RBP5.51□□□□□ -1.53
CPSF7-219ENST00000539952 TSLPQ969D9 159 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 PIGTQ969N2 578 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 EFHD2Q96C19 240 aaPredicted RBP5.51□□□□□ -1.53
CPSF7-219ENST00000539952 C12orf43Q96C57 262 aaKnown RBP5.51□□□□□ -1.53
CPSF7-219ENST00000539952 NXNL1Q96CM4 212 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 MFSD3Q96ES6 412 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 AURKBQ96GD4 344 aaPredicted RBP5.51□□□□□ -1.53
CPSF7-219ENST00000539952 PLEKHA8Q96JA3 519 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 GPR78Q96P69 363 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 PIP5K1AQ99755 562 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 FAM173AQ9BQD7 235 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 ADI1Q9BV57 179 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 OSBPL10Q9BXB5 764 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 NPLQ9BXD5 320 aaPredicted RBP5.51□□□□□ -1.53
CPSF7-219ENST00000539952 LDAHQ9H6V9 325 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 SYNPO2LQ9H987 977 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 CHRAC1Q9NRG0 131 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 ATAD3AQ9NVI7 634 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 PIH1D1Q9NWS0 290 aaKnown RBP5.51□□□□□ -1.53
CPSF7-219ENST00000539952 HPF1Q9NWY4 346 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 RHBDL2Q9NX52 303 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 SMPD3Q9NY59 655 aaPredicted RBP5.51□□□□□ -1.53
CPSF7-219ENST00000539952 KCMF1Q9P0J7 381 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 XPR1Q9UBH6 696 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 ZNF629Q9UEG4 869 aaPredicted RBP5.51□□□□□ -1.53
CPSF7-219ENST00000539952 SLC2A6Q9UGQ3 507 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 FBXW2Q9UKT8 454 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 CBLCQ9ULV8 474 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 NAALAD2Q9Y3Q0 740 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 FAM215AQ9Y5M1 114 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 PHF3Q92576 2039 aaKnown RBP5.51□□□□□ -1.53
CPSF7-219ENST00000539952 ZNF407Q9C0G0 2248 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 HEATR5BQ9P2D3 2071 aa5.51□□□□□ -1.53
CPSF7-219ENST00000539952 HIVEP2P31629 2446 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 TCRBV16S1A1N1A0A5B0 115 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 SYNDIG1LA6NDD5 238 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 URADA6NGE7 173 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 AHRRA9YTQ3 701 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 GFYI3L273 518 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 UBXN8O00124 270 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 CASKO14936 926 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 LCMT2O60294 686 aaKnown RBP5.5□□□□□ -1.53
CPSF7-219ENST00000539952 GALR3O60755 368 aaPredicted RBP5.5□□□□□ -1.53
CPSF7-219ENST00000539952 MRPS14O60783 128 aaKnown RBP5.5□□□□□ -1.53
CPSF7-219ENST00000539952 B4GALT2O60909 372 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 RDH16O75452 317 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 CDC123O75794 336 aaPredicted RBP5.5□□□□□ -1.53
CPSF7-219ENST00000539952 EPPINO95925 133 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 BCL10O95999 233 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 CHEK2O96017 543 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 HPRP00739 348 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 ESR1P03372 595 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 SLC35G6P0C7Q6 338 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 MPC1LP0DKB6 136 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 ALOX12P18054 663 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 LBPP18428 481 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 CD53P19397 219 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 NMBRP28336 390 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 MAPK1P28482 360 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 PCSK6P29122 969 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 FMO4P31512 558 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 ADH7P40394 386 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 ASCL1P50553 236 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 BCAP31P51572 246 aa5.5□□□□□ -1.53
CPSF7-219ENST00000539952 GABARAPL2P60520 117 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms