RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.78□□□□□ -0.2
RNF4-210ENST00000508235 ANKUB1A6NFN9 424 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 DUXAA6NLW8 204 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 G3V3Y1 287 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 TSPAN2O60636 221 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 UGT2B11O75310 529 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 WISP1O95388 367 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 CPSF4O95639 269 aaKnown RBP13.77□□□□□ -0.21
RNF4-210ENST00000508235 PIGAP37287 484 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 MAP3K8P41279 467 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 CASP3P42574 277 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 DNASE1L1P49184 302 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 DGKQP52824 942 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 PHC1P78364 1004 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 GAB1Q13480 694 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 SQLEQ14534 574 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 LASP1Q14847 261 aaKnown RBP13.77□□□□□ -0.21
RNF4-210ENST00000508235 HYAL4Q2M3T9 481 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 CDC73Q6P1J9 531 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 PAOXQ6QHF9 649 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 WDR53Q7Z5U6 358 aaPredicted RBP13.77□□□□□ -0.21
RNF4-210ENST00000508235 ANKRD46Q86W74 232 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 OR4N2Q8NGD1 307 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 GOT1L1Q8NHS2 421 aaPredicted RBP13.77□□□□□ -0.21
RNF4-210ENST00000508235 RFWD2Q8NHY2 731 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 DTNBP1Q96EV8 351 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 CHMP6Q96FZ7 201 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 ZNF597Q96LX8 424 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 GPR137Q96N19 417 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 ADOQ96SZ5 270 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 TTTY12Q9BZ98 90 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 PIGUQ9H490 435 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 KLRF1Q9NZS2 232 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 SEC14L3Q9UDX4 400 aa13.77□□□□□ -0.21
RNF4-210ENST00000508235 RNF103-CHMP3A0A140T963 221 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 NPIPA5E9PKD4 350 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 CBX6O95503 412 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 IL33O95760 270 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 ACP2P11117 423 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 NCF2P19878 526 aaPredicted RBP13.76□□□□□ -0.21
RNF4-210ENST00000508235 ELAVL4P26378 380 aaKnown RBP13.76□□□□□ -0.21
RNF4-210ENST00000508235 MST1P26927 711 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 LCN1P31025 176 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 MASP1P48740 699 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 CLK3P49761 638 aaKnown RBP13.76□□□□□ -0.21
RNF4-210ENST00000508235 TDGF1P3P51864 188 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 KCNK10P57789 538 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 PPIAP62937 165 aaKnown RBP13.76□□□□□ -0.21
RNF4-210ENST00000508235 RBPJQ06330 500 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 C6orf120Q7Z4R8 191 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 COX18Q8N8Q8 333 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 SLC16A11Q8NCK7 471 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 OR5AK3PQ8NH89 298 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 ADAMTS15Q8TE58 950 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 EFHD2Q96C19 240 aaPredicted RBP13.76□□□□□ -0.21
RNF4-210ENST00000508235 RMND5BQ96G75 393 aaPredicted RBP13.76□□□□□ -0.21
RNF4-210ENST00000508235 TMEM41AQ96HV5 264 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 ITCHQ96J02 903 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 YIPF4Q9BSR8 244 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 G6PC3Q9BUM1 346 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 OSBPL11Q9BXB4 747 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 HHATLQ9HCP6 504 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 ZFP64Q9NPA5 681 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 GPATCH2Q9NW75 528 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 TUBA8Q9NY65 449 aaPredicted RBP13.76□□□□□ -0.21
RNF4-210ENST00000508235 NPIPA1Q9UND3 350 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 NINQ8N4C6 2090 aa13.76□□□□□ -0.21
RNF4-210ENST00000508235 A0A0G2JMM0 328 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 A0A1W2PPB8 328 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 A0A1W2PRS3 328 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 PINLYPA6NC86 204 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 PRAMEF25A6NGN4 478 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 KIR3DP1A8MWS1 328 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 C9JVG2 144 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 RFXANKO14593 260 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 GLSO94925 669 aaPredicted RBP13.75□□□□□ -0.21
RNF4-210ENST00000508235 AGR2O95994 175 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 CHI3L1P36222 383 aaPredicted RBP13.75□□□□□ -0.21
RNF4-210ENST00000508235 RFC3P40938 356 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 ANXA11P50995 505 aaKnown RBP13.75□□□□□ -0.21
RNF4-210ENST00000508235 ARFIP2P53365 341 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 POU6F2P78424 691 aaPredicted RBP13.75□□□□□ -0.21
RNF4-210ENST00000508235 TXNL4AP83876 142 aaKnown RBP13.75□□□□□ -0.21
RNF4-210ENST00000508235 DUSP5Q16690 384 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.75□□□□□ -0.21
RNF4-210ENST00000508235 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.75□□□□□ -0.211e-6■□□□□ 8.6
RNF4-210ENST00000508235 EXOSC6Q5RKV6 272 aaKnown RBP13.75□□□□□ -0.21
RNF4-210ENST00000508235 GFRALQ6UXV0 394 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 SIAH3Q8IW03 269 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 GHDCQ8N2G8 530 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 FAM109AQ8N4B1 249 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 OR9I1Q8NGQ6 314 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 PIK3R3Q92569 461 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 C16orf58Q96GQ5 468 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 SLC35G5Q96KT7 338 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 JSRP1Q96MG2 331 aaPredicted RBP13.75□□□□□ -0.21
RNF4-210ENST00000508235 NODALQ96S42 347 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 SLC35A5Q9BS91 424 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 BTBD2Q9BX70 525 aa13.75□□□□□ -0.21
RNF4-210ENST00000508235 TMEM120AQ9BXJ8 343 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms