RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 CDH26Q8IXH8 852 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 SPAG16Q8N0X2 631 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 AQP11Q8NBQ7 271 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 NFAM1Q8NET5 270 aaPredicted RBP1.95□□□□□ -2.1
LMNB1-207ENST00000494185 OR6F1Q8NGZ6 308 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 C11orf45Q8TAV5 145 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 TRMT10AQ8TBZ6 339 aaKnown RBP1.95□□□□□ -2.1
LMNB1-207ENST00000494185 RNF139Q8WU17 664 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 SPRYD4Q8WW59 207 aaPredicted RBP1.95□□□□□ -2.1
LMNB1-207ENST00000494185 OSTF1Q92882 214 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 EMG1Q92979 244 aaKnown RBP1.95□□□□□ -2.1
LMNB1-207ENST00000494185 MRPL24Q96A35 216 aaKnown RBP1.95□□□□□ -2.1
LMNB1-207ENST00000494185 PCED1BQ96HM7 432 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 TPD52L3Q96J77 140 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 COG3Q96JB2 828 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 ZNF597Q96LX8 424 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 PLIN2Q99541 437 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 OMDQ99983 421 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 EDEM2Q9BV94 578 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 NLNQ9BYT8 704 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 OCR1Q9BZK8 76 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 PARLQ9H300 379 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 VCX2Q9H322 139 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 KAT8Q9H7Z6 458 aaKnown RBP1.95□□□□□ -2.1
LMNB1-207ENST00000494185 APMAPQ9HDC9 416 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 TRPV5Q9NQA5 729 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 CTSZQ9UBR2 303 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 RNF14Q9UBS8 474 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 TUBGCP4Q9UGJ1 667 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 CHRNA9Q9UGM1 479 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 IKZF3Q9UKT9 509 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 MRPS33Q9Y291 106 aaKnown RBP1.95□□□□□ -2.1
LMNB1-207ENST00000494185 SLC6A5Q9Y345 797 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 OR10H1Q9Y4A9 318 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 RNF115Q9Y4L5 304 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 SLCO1B1Q9Y6L6 691 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 SPACA6W5XKT8 324 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 CACNA1FO60840 1977 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 KANK1Q14678 1352 aa1.95□□□□□ -2.1
LMNB1-207ENST00000494185 KIF7Q2M1P5 1343 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 IGLV4-3A0A075B6K6 122 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 A0A0A6YYD4 124 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 NPIPA5A0A0B4J1W7 369 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 ZSCAN5BA6NJL1 495 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 LRRC30A6NM36 301 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 ANHXE9PGG2 379 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 NPIPA2E9PIF3 369 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 NPIPA5E9PKD4 350 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 G3V2L1 256 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 SGK1O00141 431 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 ALOX15BO15296 676 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 SIGLEC5O15389 551 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 CFLARO15519 480 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 TNFSF12O43508 249 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 JAK2O60674 1132 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 SNNO75324 88 aaPredicted RBP1.94□□□□□ -2.1
LMNB1-207ENST00000494185 BCAS1O75363 584 aaPredicted RBP1.94□□□□□ -2.1
LMNB1-207ENST00000494185 ANXA9O76027 345 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 TOXO94900 526 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 NXPH4O95158 308 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 FHP07954 510 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 GSTA1P08263 222 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 ANXA4P09525 319 aaPredicted RBP1.94□□□□□ -2.1
LMNB1-207ENST00000494185 CYP11B1P15538 503 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 NT5EP21589 574 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 PAX7P23759 505 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 CCNCP24863 283 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 SPRP35270 261 aaPredicted RBP1.94□□□□□ -2.1
LMNB1-207ENST00000494185 CEBPDP49716 269 aaPredicted RBP1.94□□□□□ -2.1
LMNB1-207ENST00000494185 RGS4P49798 205 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 ATP5IP56385 69 aaPredicted RBP1.94□□□□□ -2.1
LMNB1-207ENST00000494185 RPL27P61353 136 aaKnown RBP1.94□□□□□ -2.1
LMNB1-207ENST00000494185 RPL23AP62750 156 aaKnown RBP1.94□□□□□ -2.1
LMNB1-207ENST00000494185 MRPS6P82932 125 aaKnown RBP1.94□□□□□ -2.1
LMNB1-207ENST00000494185 BEX3Q00994 111 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 TNFRSF17Q02223 184 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 CNTN2Q02246 1040 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 CSTF1Q05048 431 aaKnown RBP1.94□□□□□ -2.1
LMNB1-207ENST00000494185 ZP4Q12836 540 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 MRPL28Q13084 256 aaKnown RBP1.94□□□□□ -2.1
LMNB1-207ENST00000494185 ITPK1Q13572 414 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 EXOSC2Q13868 293 aaKnown RBP1.94□□□□□ -2.1
LMNB1-207ENST00000494185 LY6DQ14210 128 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 ZMYND11Q15326 602 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 EXOC3L2Q2M3D2 409 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 RABGAP1LQ5R372 815 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 MUC21Q5SSG8 566 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 SLC25A30Q5SVS4 291 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 DMKNQ6E0U4 476 aaPredicted RBP1.94□□□□□ -2.1
LMNB1-207ENST00000494185 BAIAP2L2Q6UXY1 529 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 ZNF730Q6ZMV8 503 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 GPRIN3Q6ZVF9 776 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 TAS2R42Q7RTR8 314 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 P4HA3Q7Z4N8 544 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 NET1Q7Z628 596 aaPredicted RBP1.94□□□□□ -2.1
LMNB1-207ENST00000494185 SLC47A2Q86VL8 602 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 LRRC49Q8IUZ0 686 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 EFCAB13Q8IY85 973 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 ZNF683Q8IZ20 524 aa1.94□□□□□ -2.1
LMNB1-207ENST00000494185 LINC00518Q8N0U6 118 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms