RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	SLITRK5	O94991	958 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	LAMP1	P11279	417 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	CNR1	P21554	472 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	ELAVL4	P26378	380 aa	Known RBP	11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	ABCD3	P28288	659 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	SSTR2	P30874	369 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	EMD	P50402	254 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	PPIA	P62937	165 aa	Known RBP	11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	PDE7A	Q13946	482 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	CEBPE	Q15744	281 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	ZNF791	Q3KP31	576 aa	Predicted RBP	11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	TMEM211	Q6ICI0	200 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	PAOX	Q6QHF9	649 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	C3P1	Q6ZMU1	363 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	ACAD11	Q709F0	780 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	SLC22A16	Q86VW1	577 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	FAM109A	Q8N4B1	249 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	ZNF441	Q8N8Z8	693 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	ASB5	Q8WWX0	329 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	SLC9A6	Q92581	669 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	TMBIM1	Q969X1	311 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	ADIPOR1	Q96A54	375 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	SDCCAG3	Q96C92	435 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	CTHRC1	Q96CG8	243 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	ERP27	Q96DN0	273 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	ELP4	Q96EB1	424 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	HSPBAP1	Q96EW2	488 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	ZBTB18	Q99592	522 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	DUSP26	Q9BV47	211 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	EXO5	Q9H790	373 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	IL1RL2	Q9HB29	575 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	C3orf14	Q9HBI5	128 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	TAS2R7	Q9NYW3	318 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	KLRF1	Q9NZS2	232 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	ATP6V1H	Q9UI12	483 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	NCKAP5	O14513	1909 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	ANKRD17	O75179	2603 aa	Known RBP	11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	ADGRG4	Q8IZF6	3080 aa		11.66	□□□□□ -0.54
FDPS-204	ENST00000461507	UPK1A	O00322	258 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	KLF11	O14901	512 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	ACOX3	O15254	700 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	PLOD3	O60568	738 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	PPM1B	O75688	479 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	PDE9A	O76083	593 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	C6orf47	O95873	294 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	PPIC	P45877	212 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	PRR5	P85299	388 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	TP53BP2	Q13625	1128 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	TOMM20	Q15388	145 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	NTRK2	Q16620	822 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	SMU1	Q2TAY7	513 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	LSM12	Q3MHD2	195 aa	Known RBP	11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	SLC9B1	Q4ZJI4	515 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	BICRAL	Q6AI39	1079 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	OR4F3	Q6IEY1	312 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	TRIL	Q7L0X0	811 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	FBXW8	Q8N3Y1	598 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	TMEM251	Q8N6I4	163 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	NUP43	Q8NFH3	380 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	PAQR8	Q8TEZ7	354 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	EFHD2	Q96C19	240 aa	Predicted RBP	11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	THOC1	Q96FV9	657 aa	Known RBP	11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	OTUB1	Q96FW1	271 aa	Predicted RBP	11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	YIPF4	Q9BSR8	244 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	DEFB127	Q9H1M4	99 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507		Q9N2J8	555 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	SLCO1B3	Q9NPD5	702 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	ZNF446	Q9NWS9	450 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	TUBA8	Q9NY65	449 aa	Predicted RBP	11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	COQ3	Q9NZJ6	369 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	BOK	Q9UMX3	212 aa	Predicted RBP	11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	PCDHGB4	Q9UN71	923 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	C19orf53	Q9UNZ5	99 aa	Predicted RBP	11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	MAPRE3	Q9UPY8	281 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	LIPG	Q9Y5X9	500 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	USH1C	Q9Y6N9	552 aa		11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	11.65	□□□□□ -0.54
FDPS-204	ENST00000461507	ARHGAP21	Q5T5U3	1957 aa		11.65	□□□□□ -0.55
FDPS-204	ENST00000461507		A0A087WV62	115 aa		11.64	□□□□□ -0.55
FDPS-204	ENST00000461507		C9JVG2	144 aa		11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	BCKDK	O14874	412 aa		11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	POLR3G	O15318	223 aa	Predicted RBP	11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	EMC8	O43402	210 aa		11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	TBX19	O60806	448 aa		11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	CPSF4	O95639	269 aa	Known RBP	11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	SNRPB2	P08579	225 aa	Known RBP	11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	DRD5	P21918	477 aa		11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	CHRNB4	P30926	498 aa		11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	SOX18	P35713	384 aa		11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	CLNS1A	P54105	237 aa	Known RBP	11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	CLDN8	P56748	225 aa		11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	TFF3	Q07654	80 aa		11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	VPS26B	Q4G0F5	336 aa		11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	TMEM198	Q66K66	360 aa		11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	DESI1	Q6ICB0	168 aa		11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	NPSR1	Q6W5P4	371 aa		11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	LARP4	Q71RC2	724 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
FDPS-204	ENST00000461507	SPATA19	Q7Z5L4	167 aa		11.64	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms