RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 FAM27D1Q5T7N8 215 aa17.57■□□□□ 0.4
PTPA-223ENST00000452489 PRSS45Q7RTY3 260 aa17.57■□□□□ 0.4
PTPA-223ENST00000452489 HDDC3Q8N4P3 179 aa17.57■□□□□ 0.4
PTPA-223ENST00000452489 DMBX1Q8NFW5 382 aa17.57■□□□□ 0.4
PTPA-223ENST00000452489 MRPS31Q92665 395 aaKnown RBP17.57■□□□□ 0.4
PTPA-223ENST00000452489 LCORQ96JN0 433 aaPredicted RBP17.57■□□□□ 0.4
PTPA-223ENST00000452489 POLDIP3Q9BY77 421 aaKnown RBP17.57■□□□□ 0.4
PTPA-223ENST00000452489 TMPRSS13Q9BYE2 586 aa17.57■□□□□ 0.4
PTPA-223ENST00000452489 P2RY12Q9H244 342 aa17.57■□□□□ 0.4
PTPA-223ENST00000452489 NANSQ9NR45 359 aa17.57■□□□□ 0.4
PTPA-223ENST00000452489 MKL2Q9ULH7 1088 aa17.57■□□□□ 0.4
PTPA-223ENST00000452489 AP1M2Q9Y6Q5 423 aa17.57■□□□□ 0.4
PTPA-223ENST00000452489 C2orf81A6NN90 581 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 SH3BGRLO75368 114 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 RORAP35398 523 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 AKR1C2P52895 323 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 AKR1C1Q04828 323 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 KRT78Q8N1N4 520 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 TRMT10AQ8TBZ6 339 aaKnown RBP17.56■□□□□ 0.4
PTPA-223ENST00000452489 GNPDA2Q8TDQ7 276 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 CSGALNACT1Q8TDX6 532 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 MS4A4EQ96PG1 132 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 FUZQ9BT04 418 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 AUNIPQ9H7T9 357 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 DHCR7Q9UBM7 475 aaKnown RBP17.56■□□□□ 0.4
PTPA-223ENST00000452489 SULT1C2O00338 296 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 PRAMEF2O60811 474 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 SERPINA3P01011 423 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 ELAVL4P26378 380 aaKnown RBP17.56■□□□□ 0.4
PTPA-223ENST00000452489 PRKAR1BP31321 381 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 ATP5C1P36542 298 aaKnown RBP17.56■□□□□ 0.4
PTPA-223ENST00000452489 RAP2BP61225 183 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 ZNF155Q12901 538 aaPredicted RBP17.56■□□□□ 0.4
PTPA-223ENST00000452489 DUSP4Q13115 394 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 GINS1Q14691 196 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 FKBP1CQ5VVH2 108 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 HACD4Q5VWC8 232 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 PGBD2Q6P3X8 592 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 NPAS3Q8IXF0 933 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 PHOSPHO2Q8TCD6 241 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 R3HDMLQ9H3Y0 253 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 FGF20Q9NP95 211 aaPredicted RBP17.56■□□□□ 0.4
PTPA-223ENST00000452489 MED11Q9P086 117 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 KCND3Q9UK17 655 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 CORO2BQ9UQ03 480 aa17.56■□□□□ 0.4
PTPA-223ENST00000452489 KCNE1BA0A087WTH5 132 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 OR6C74A6NCV1 312 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 ARHGEF33A8MVX0 844 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 ARPC1BO15143 372 aaKnown RBP17.55■□□□□ 0.4
PTPA-223ENST00000452489 SMAD6O43541 496 aaKnown RBP17.55■□□□□ 0.4
PTPA-223ENST00000452489 HIST1H2ABP04908 130 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 S100PP25815 95 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 SHC1P29353 583 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 SLC1A3P43003 542 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 RAB40BQ12829 278 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 KLF9Q13886 244 aaPredicted RBP17.55■□□□□ 0.4
PTPA-223ENST00000452489 BOP1Q14137 746 aaKnown RBP17.55■□□□□ 0.4
PTPA-223ENST00000452489 AVPI1Q5T686 147 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 SLC30A6Q6NXT4 461 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 HIST3H2AQ7L7L0 130 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 TSPAN33Q86UF1 283 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 TMEM17Q86X19 198 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 FBXO16Q8IX29 292 aaPredicted RBP17.55■□□□□ 0.4
PTPA-223ENST00000452489 RXFP4Q8TDU9 374 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 HIST1H2ACQ93077 130 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 SMARCD1Q96GM5 515 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 SPSB2Q99619 263 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 QRSL1Q9H0R6 528 aaKnown RBP17.55■□□□□ 0.4
PTPA-223ENST00000452489 BARX1Q9HBU1 254 aaPredicted RBP17.55■□□□□ 0.4
PTPA-223ENST00000452489 PRMT8Q9NR22 394 aaPredicted RBP17.55■□□□□ 0.4
PTPA-223ENST00000452489 ADAM12O43184 909 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 PIP5K1CO60331 668 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 KLK3P07288 261 aaPredicted RBP17.55■□□□□ 0.4
PTPA-223ENST00000452489 FPR3P25089 353 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 PTGER3P43115 390 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 CTSOP43234 321 aaPredicted RBP17.55■□□□□ 0.4
PTPA-223ENST00000452489 PTRHD1Q6GMV3 140 aaKnown RBP17.55■□□□□ 0.4
PTPA-223ENST00000452489 CLDN19Q8N6F1 224 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 OR4F15Q8NGB8 312 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 RBM14Q96PK6 669 aaKnown RBP17.55■□□□□ 0.4
PTPA-223ENST00000452489 BOCQ9BWV1 1114 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 BTBD1Q9H0C5 482 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 GAREM1Q9H706 876 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 PTGFRNQ9P2B2 879 aa17.55■□□□□ 0.4
PTPA-223ENST00000452489 ABHD14A-ACY1A0A1B0GW23 586 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 TMEM82A0PJX8 343 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 SLC9B1P1A6NJY1 282 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 CDC123O75794 336 aaPredicted RBP17.54■□□□□ 0.4
PTPA-223ENST00000452489 MTNR1AP48039 350 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 CDK6Q00534 326 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 MANEAQ5SRI9 462 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 CPTPQ5TA50 214 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 FGF11Q92914 225 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 FUBP3Q96I24 572 aaKnown RBP eCLIP17.54■□□□□ 0.4
PTPA-223ENST00000452489 OR1F2PQ96R84 312 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 CPEB1Q9BZB8 566 aaKnown RBP17.54■□□□□ 0.4
PTPA-223ENST00000452489 MAP4K5Q9Y4K4 846 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 NINQ8N4C6 2090 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 CCDC88CQ9P219 2028 aa17.54■□□□□ 0.4
PTPA-223ENST00000452489 MEX3AA1L020 520 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms