RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 KMT5CQ86Y97 462 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 PLXDC1Q8IUK5 500 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 ENTHD1Q8IYW4 607 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 ZNF619Q8N2I2 560 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 OR52P1PQ8NH57 321 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 VANGL1Q8TAA9 524 aaPredicted RBP9.72□□□□□ -0.85
VPS25-203ENST00000589520 CNIH3Q8TBE1 160 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 HOXB13Q92826 284 aaPredicted RBP9.72□□□□□ -0.85
VPS25-203ENST00000589520 SLC35B4Q969S0 331 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 MUL1Q969V5 352 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 ISOC1Q96CN7 298 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 MVB12AQ96EY5 273 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 RBM18Q96H35 190 aaKnown RBP9.72□□□□□ -0.85
VPS25-203ENST00000589520 MPP4Q96JB8 637 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 CSF3RQ99062 836 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 NIPSNAP1Q9BPW8 284 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 YIPF4Q9BSR8 244 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 FUZQ9BT04 418 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 KLHL25Q9H0H3 589 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 GPN2Q9H9Y4 310 aaPredicted RBP9.72□□□□□ -0.85
VPS25-203ENST00000589520 FANCEQ9HB96 536 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 FAM60AQ9NP50 221 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 NDOR1Q9UHB4 597 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 RNF6Q9Y252 685 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 WDR45Q9Y484 360 aa9.72□□□□□ -0.85
VPS25-203ENST00000589520 TRBV4-1A0A0J9YWV2 114 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 ZAR1LA6NP61 321 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 CLCA1A8K7I4 914 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 K7ESF4 209 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 FGF17O60258 216 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 PCDHGA12O60330 932 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 OR10H2O60403 315 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 FMO6PO60774 539 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 CYP7B1O75881 506 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 PIAS2O75928 621 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 CCNYL3P0C7X3 344 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 ALPPL2P10696 532 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 GNSP15586 552 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 PCMT1P22061 227 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 MAOBP27338 520 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 MAP3K8P41279 467 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 MLLT3P42568 568 aaPredicted RBP9.71□□□□□ -0.86
VPS25-203ENST00000589520 CTSKP43235 329 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 ST13P50502 369 aaKnown RBP9.71□□□□□ -0.86
VPS25-203ENST00000589520 HSD17B7P56937 341 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 TAS2R41P59536 307 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 SNRPGP62308 76 aaKnown RBP9.71□□□□□ -0.86
VPS25-203ENST00000589520 SHC2P98077 582 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 STX4Q12846 297 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 NR1D2Q14995 579 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 PTGES3Q15185 160 aaKnown RBP9.71□□□□□ -0.86
VPS25-203ENST00000589520 CYP27C1Q4G0S4 372 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 SLC25A30Q5SVS4 291 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 SYT6Q5T7P8 510 aaPredicted RBP9.71□□□□□ -0.86
VPS25-203ENST00000589520 MEDAGQ5VYS4 303 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 SLX4IPQ5VYV7 408 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 GTF2IRD2BQ6EKJ0 949 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 TYW3Q6IPR3 259 aaKnown RBP9.71□□□□□ -0.86
VPS25-203ENST00000589520 KLHL17Q6TDP4 642 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 RRM2BQ7LG56 351 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 GTF2IRD2Q86UP8 949 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 DEFB119Q8N690 84 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 SLC16A11Q8NCK7 471 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 C9orf43Q8TAL5 461 aaPredicted RBP9.71□□□□□ -0.86
VPS25-203ENST00000589520 FAM81AQ8TBF8 368 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 GNPDA2Q8TDQ7 276 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 SLC9A6Q92581 669 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 ANKRD9Q96BM1 317 aaPredicted RBP9.71□□□□□ -0.86
VPS25-203ENST00000589520 C12orf43Q96C57 262 aaKnown RBP9.71□□□□□ -0.86
VPS25-203ENST00000589520 OTUB1Q96FW1 271 aaPredicted RBP9.71□□□□□ -0.86
VPS25-203ENST00000589520 CRELD1Q96HD1 420 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 AHCYL2Q96HN2 611 aaKnown RBP9.71□□□□□ -0.86
VPS25-203ENST00000589520 PHOX2BQ99453 314 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 SDF2Q99470 211 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 MAP3K3Q99759 626 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 LMF2Q9BU23 707 aaKnown RBP9.71□□□□□ -0.86
VPS25-203ENST00000589520 TEX12Q9BXU0 123 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 PRRG3Q9BZD7 231 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 CCDC90BQ9GZT6 254 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 ZNF350Q9GZX5 532 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 PRTFDC1Q9NRG1 225 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 RLIMQ9NVW2 624 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 CLN6Q9NWW5 311 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 MAT2BQ9NZL9 334 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 CNOT2Q9NZN8 540 aaKnown RBP9.71□□□□□ -0.86
VPS25-203ENST00000589520 SEMA5BQ9P283 1151 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 SUSD2Q9UGT4 822 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 PSORS1C1Q9UIG5 152 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 CDC14AQ9UNH5 594 aa9.71□□□□□ -0.86
VPS25-203ENST00000589520 MRPS2Q9Y399 296 aaKnown RBP9.71□□□□□ -0.86
VPS25-203ENST00000589520 KMT2BQ9UMN6 2715 aaPredicted RBP9.7□□□□□ -0.86
VPS25-203ENST00000589520 EFCAB10A6NFE3 127 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 AGAP5A6NIR3 686 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 SNTNA6NMZ2 147 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 SGK494L7N484 410 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 TOX3O15405 576 aaPredicted RBP9.7□□□□□ -0.86
VPS25-203ENST00000589520 ZNF749O43361 778 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 B4GAT1O43505 415 aa9.7□□□□□ -0.86
VPS25-203ENST00000589520 NME6O75414 186 aaPredicted RBP9.7□□□□□ -0.86
VPS25-203ENST00000589520 WBP4O75554 376 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms