RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 EMP2P54851 167 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 PKNOX1P55347 436 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 RPS13P62277 151 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 RNF4P78317 190 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 KCNJ10P78508 379 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 TNP2Q05952 138 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 TGM3Q08188 693 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 FOXO1Q12778 655 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 LCP2Q13094 533 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 RUNX2Q13950 521 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 RBBP7Q16576 425 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 MPEG1Q2M385 716 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 ZNF674Q2M3X9 581 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 DEFB109BQ30KR1 87 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 LINC00303Q3SY05 128 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 KHDRBS2Q5VWX1 349 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 METTL21CQ5VZV1 264 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 OR4C11Q6IEV9 310 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 TRIM40Q6P9F5 258 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 SHISA6Q6ZSJ9 500 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 GPRIN3Q6ZVF9 776 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 RAB43Q86YS6 212 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 CA13Q8N1Q1 262 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 ANKFN1Q8N957 763 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 PLPP5Q8NEB5 264 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 OR5T3Q8NGG3 340 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 OR6Y1Q8NGX8 325 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 ANGPTL6Q8NI99 470 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 METTL6Q8TCB7 284 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 TSPEARQ8WU66 669 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 APOBEC4Q8WW27 367 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 NANOS1Q8WY41 292 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 EXTL1Q92935 676 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 FBXW5Q969U6 566 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 RGMAQ96B86 450 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 WBP1Q96G27 269 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 PEX11GQ96HA9 241 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 ADAD1Q96M93 576 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 KCNC2Q96PR1 638 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 OR1F2PQ96R84 312 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 TBCDQ9BTW9 1192 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 GATA5Q9BWX5 397 aaPredicted RBP5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 ROGDIQ9GZN7 287 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 QRSL1Q9H0R6 528 aaKnown RBP5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 OR51B5Q9H339 312 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 C14orf105Q9NVL8 296 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 KCMF1Q9P0J7 381 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 HCN3Q9P1Z3 774 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 C3orf18Q9UK00 162 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 NPFFR2Q9Y5X5 522 aa5.88□□□□□ -1.47
ATPAF1-209ENST00000529214 USP24Q9UPU5 2620 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 A0A1W2PPH5 198 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 OR2W5A6NFC9 320 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 NDUFS8O00217 210 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 SAP18O00422 153 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 PLPP1O14494 284 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 SOCS6O14544 535 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 PCDH17O14917 1159 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 TM9SF1O15321 606 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 NOL3O60936 208 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 ADAM11O75078 769 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 SH3BGRLO75368 114 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 SEC22BO75396 215 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 ETHE1O95571 254 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 PDYNP01213 254 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 ENO1P06733 434 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 BPGMP07738 259 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 FHP07954 510 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 CYC1P08574 325 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 FGF4P08620 206 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 QDPRP09417 244 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 CLUP10909 449 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 EPHA1P21709 976 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 HIST1H1TP22492 207 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 ATP5A1P25705 553 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 OTX2P32243 289 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 BSGP35613 385 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 TSFMP43897 325 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 CCR10P46092 362 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 KRT6CP48668 564 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 EFNA3P52797 238 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 SLC16A1P53985 500 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 SLC18A1P54219 525 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 POLE2P56282 527 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 TSPAN5P62079 268 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 ZNF33BQ06732 778 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 RIPK1Q13546 671 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 DDX39BQ13838 428 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 AP5B1Q2VPB7 878 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 TTMPQ5BVD1 217 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 ZBTB37Q5TC79 503 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 JMJD6Q6NYC1 403 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 RPUSD3Q6P087 351 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 PCSK4Q6UW60 755 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 TMEM205Q6UW68 189 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 KIRREL2Q6UWL6 708 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 ZNF793Q6ZN11 406 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 PPP1R32Q7Z5V6 425 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 CDH24Q86UP0 819 aa5.87□□□□□ -1.47
ATPAF1-209ENST00000529214 PRSS58Q8IYP2 241 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms