RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 RPP38P78345 283 aaKnown RBP4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 RELQ04864 619 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 SLC20A2Q08357 652 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 TRAP1Q12931 704 aaKnown RBP4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 PDE7AQ13946 482 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 NFATC4Q14934 902 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 ODF3L2Q3SX64 289 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 POM121L1PQ3SYA9 428 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 SLC35D3Q5M8T2 416 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 PDSS1Q5T2R2 415 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 TTC27Q6P3X3 843 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 FAM171BQ6P995 826 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 MMD2Q8IY49 270 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 METTL27Q8N6F8 245 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 TMEM99Q8N816 258 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 ELP5Q8TE02 316 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 TCP11Q8WWU5 503 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 SYAP1Q96A49 352 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 SCRN2Q96FV2 425 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 TSGA13Q96PP4 275 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 TRAF4Q9BUZ4 470 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 P2RY12Q9H244 342 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 ZBTB20Q9HC78 741 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 GPN1Q9HCN4 374 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 MRPL40Q9NQ50 206 aaKnown RBP4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 EXOC1Q9NV70 894 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 ELOVL5Q9NYP7 299 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 RCOR3Q9P2K3 495 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 TEKT2Q9UIF3 430 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 DAPK2Q9UIK4 370 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 CPQQ9Y646 472 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 U3KQA8 63 aa4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 INTS1Q8N201 2190 aaKnown RBP4.24□□□□□ -1.73
HMGB1P23-201ENST00000518743 BIRC6Q9NR09 4857 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 A0A1B0GUA9 196 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 A0A1W2PS18 150 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 TMEM129A0AVI4 362 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 MAGEB16A2A368 324 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 ASPDHA6ND91 283 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 CFAP73A6NFT4 308 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 C17orf105B2RV13 164 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 HNRNPCL2B2RXH8 293 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 D6RAR5 112 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 HIP1O00291 1037 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 PHF1O43189 567 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 CYTH3O43739 400 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 RAD1O60671 282 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 ATP6V1G1O75348 118 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 CLN5O75503 358 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 TOMM40O96008 361 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 RAF1P04049 648 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 RPLP0P05388 317 aaKnown RBP4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 MBL2P11226 248 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 ETS1P14921 441 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 HMGA1P17096 107 aaKnown RBP4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 ITGA2P17301 1181 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 ZNF132P52740 706 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 GALK2Q01415 458 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 DEFA6Q01524 100 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 ZNF415Q09FC8 603 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 ABRQ12979 859 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 SNTA1Q13424 505 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 TRA2AQ13595 282 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 DPYSQ14117 519 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 EMC2Q15006 297 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 FASTKD1Q53R41 847 aaKnown RBP4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 ARMCX4Q5H9R4 360 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 C20orf194Q5TEA3 1177 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 UNQ6126/PRO20091Q6UXV3 157 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 CREB3L2Q70SY1 520 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 PIWIL4Q7Z3Z4 852 aaKnown RBP4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 TAF8Q7Z7C8 310 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 PRUNE1Q86TP1 453 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 PLD3Q8IV08 490 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 TMEM139Q8IV31 216 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 ODF3L1Q8IXM7 274 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 FBXL14Q8N1E6 418 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 CRYBG2Q8N1P7 616 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 NRACQ8N912 160 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 SLC16A11Q8NCK7 471 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 WFDC11Q8NEX6 87 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 SLC24A4Q8NFF2 622 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 OR1J1Q8NGS3 322 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 OR2T3Q8NH03 318 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 OR52N5Q8NH56 324 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 LILRB1Q8NHL6 650 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 ITLN2Q8WWU7 325 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 NAT6Q93015 286 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 TMEM159Q96B96 161 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 SLCO4A1Q96BD0 722 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 RTP4Q96DX8 246 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 ADGRG7Q96K78 797 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 CEP170P1Q96L14 293 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 DDX50Q9BQ39 737 aaKnown RBP4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 ZNF559Q9BR84 538 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 BBS2Q9BXC9 721 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 EBF2Q9HAK2 575 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 HOMER3Q9NSC5 361 aa4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 ZCCHC3Q9NUD5 404 aaKnown RBP4.23□□□□□ -1.73
HMGB1P23-201ENST00000518743 C19orf25Q9UFG5 118 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms