RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 RAET1LQ5VY80 246 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 PPP4R4Q6NUP7 873 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 STAC2Q6ZMT1 411 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 BEND4Q6ZU67 534 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 STK32CQ86UX6 486 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 OR6K3Q8NGY3 331 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 LRRC39Q96DD0 335 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 NTMT1Q9BV86 223 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 ACTR6Q9GZN1 396 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 OR10A4Q9H209 315 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 RHOJQ9H4E5 214 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 NGBQ9NPG2 151 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 LZTFL1Q9NQ48 299 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 PRODH2Q9UF12 536 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 TSC22D4Q9Y3Q8 395 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 ANGPTL3Q9Y5C1 460 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 SNX8Q9Y5X2 465 aa11.29□□□□□ -0.6
DDX41-215ENST00000512431 WIPF1O43516 503 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 SSX4O60224 188 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 GPRIN2O60269 458 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 IGHV4-39P01824 125 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 GBAP04062 536 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 CD3EP07766 207 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 PYGBP11216 843 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 HK1P19367 917 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 S1PR1P21453 382 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 MAP4K2Q12851 820 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 FAPQ12884 760 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 EFR3AQ14156 821 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 FRG1Q14331 258 aaKnown RBP11.28□□□□□ -0.6
DDX41-215ENST00000512431 EXOSC7Q15024 291 aaKnown RBP11.28□□□□□ -0.6
DDX41-215ENST00000512431 LIPJQ5W064 366 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 RAB3IL1Q8TBN0 382 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 STAG3L4Q8TBR4 150 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 TMBIM1Q969X1 311 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 ADOQ96SZ5 270 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 LRRC1Q9BTT6 524 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 ZNF717Q9BY31 904 aaPredicted RBP11.28□□□□□ -0.6
DDX41-215ENST00000512431 ESRP2Q9H6T0 727 aaKnown RBP11.28□□□□□ -0.6
DDX41-215ENST00000512431 PLAC1Q9HBJ0 212 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 STOML1Q9UBI4 398 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 GPR52Q9Y2T5 361 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 PLLPQ9Y342 182 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 MAGED1Q9Y5V3 778 aaPredicted RBP11.28□□□□□ -0.6
DDX41-215ENST00000512431 USF3Q68DE3 2245 aa11.28□□□□□ -0.6
DDX41-215ENST00000512431 GOLGA6L10A0A0M3HER8 536 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 SUPT3HB4E1H0 165 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 H3BML4 177 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 TO15178 435 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 GUCY1B2O75343 617 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 SUPT3HO75486 399 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 DANCRP0C864 163 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 STMN1P16949 149 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 IL12BP29460 328 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 FNTAP49354 379 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 SUCLG1P53597 346 aaKnown RBP11.27□□□□□ -0.61
DDX41-215ENST00000512431 CASP9P55211 416 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 CLDN15P56746 228 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 B3GALT5-AS1P59052 145 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 MRPS22P82650 360 aaKnown RBP11.27□□□□□ -0.61
DDX41-215ENST00000512431 GUSBP1Q15486 140 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 NRF1Q16656 503 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 PRICKLE4Q2TBC4 344 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 TMEM249Q2WGJ8 235 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 STEAP4Q687X5 459 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 FAM111BQ6SJ93 734 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 DNM1P46Q6ZS02 220 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 TEX9Q8N6V9 391 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 STEAP2Q8NFT2 490 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 OR52R1Q8NGF1 315 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 LILRB1Q8NHL6 650 aaPredicted RBP11.27□□□□□ -0.61
DDX41-215ENST00000512431 SLC35A4Q96G79 324 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 MS4A14Q96JA4 679 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 PBKQ96KB5 322 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 TNFRSF13CQ96RJ3 184 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 PTGES2Q9H7Z7 377 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 CAB39LQ9H9S4 337 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 SDHAF3Q9NRP4 125 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 FAIMQ9NVQ4 179 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 NUDT4Q9NZJ9 180 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 PPP4R1LQ9P1A2 415 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 TXNDC16Q9P2K2 825 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 PSME2Q9UL46 239 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 ZNF337Q9Y3M9 751 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 MED12Q93074 2177 aa11.27□□□□□ -0.61
DDX41-215ENST00000512431 H0YC42 278 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 H0YIV9 168 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 UBFD1O14562 309 aaKnown RBP11.26□□□□□ -0.61
DDX41-215ENST00000512431 PHGDHO43175 533 aaKnown RBP11.26□□□□□ -0.61
DDX41-215ENST00000512431 ERAL1O75616 437 aaKnown RBP11.26□□□□□ -0.61
DDX41-215ENST00000512431 ATP1B1P05026 303 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 SRD5A1P18405 259 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 CSNK2A2P19784 350 aaPredicted RBP11.26□□□□□ -0.61
DDX41-215ENST00000512431 IL11P20809 199 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 NUDT6P53370 316 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 TPD52P55327 224 aaPredicted RBP11.26□□□□□ -0.61
DDX41-215ENST00000512431 DSCR9P59020 149 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 PSPHP78330 225 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 GANABQ14697 944 aaKnown RBP11.26□□□□□ -0.61
DDX41-215ENST00000512431 LIPNQ5VXI9 398 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms