RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	MANF	P55145	182 aa	Known RBP	12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	MAGOH	P61326	146 aa	Known RBP	12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	STX3	Q13277	289 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	TOMM20	Q15388	145 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	IL23R	Q5VWK5	629 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	WDR53	Q7Z5U6	358 aa	Predicted RBP	12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	OR4N2	Q8NGD1	307 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	HGD	Q93099	445 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	GNRHR2	Q96P88	292 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	ADO	Q96SZ5	270 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	KLRF1	Q9NZS2	232 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	ACAD8	Q9UKU7	415 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	C19orf53	Q9UNZ5	99 aa	Predicted RBP	12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	RAP2C	Q9Y3L5	183 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	HRH3	Q9Y5N1	445 aa		12.96	□□□□□ -0.33
CCHCR1-222	ENST00000507459	EXPH5	Q8NEV8	1989 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459		E9PLN8	166 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	PLOD2	O00469	737 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	ADAM10	O14672	748 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	SLITRK5	O94991	958 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	IL12B	P29460	328 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	HPCAL1	P37235	193 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	RPL14	P50914	215 aa	Known RBP	12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	SMS	P52788	366 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	PRKAG1	P54619	331 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	PTGR1	Q14914	329 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	GXYLT1	Q4G148	440 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	ANGPTL8	Q6UXH0	198 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	RPTN	Q6XPR3	784 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	LARP4	Q71RC2	724 aa	Known RBP eCLIP	12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	SZRD1	Q7Z422	152 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	R3HCC1L	Q7Z5L2	792 aa	Known RBP	12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	EID3	Q8N140	333 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	OR2L13	Q8N349	312 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	ZNF808	Q8N4W9	903 aa	Predicted RBP	12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	OR7A2P	Q8NGA2	310 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	ZFP28	Q8NHY6	868 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	EFHD2	Q96C19	240 aa	Predicted RBP	12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	TMCO6	Q96DC7	493 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	ZBED6CL	Q96FA7	236 aa	Predicted RBP	12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	COL21A1	Q96P44	957 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	SORT1	Q99523	831 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	VKORC1	Q9BQB6	163 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	OSBPL11	Q9BXB4	747 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	SLC6A15	Q9H2J7	730 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	TP63	Q9H3D4	680 aa	Predicted RBP	12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	TMBIM4	Q9HC24	238 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	GALNT9	Q9HCQ5	603 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	EQTN	Q9NQ60	294 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	PNPLA3	Q9NST1	481 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	ALKBH4	Q9NXW9	302 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	NCKAP5	O14513	1909 aa		12.95	□□□□□ -0.34
CCHCR1-222	ENST00000507459	FREM3	P0C091	2139 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459		A0A1B0GVC2	190 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	PRAMEF25	A6NGN4	478 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	OR6C70	A6NIJ9	312 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	PRSS44	E7EML9	344 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	AQP7	O14520	342 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	SCAMP2	O15127	329 aa	Known RBP	12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	SUSD5	O60279	629 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	TSPAN2	O60636	221 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	HCN1	O60741	890 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	TBX19	O60806	448 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	ICOSLG	O75144	302 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	PRPS2	P11908	318 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	RFX3	P48380	749 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	CDK9	P50750	372 aa	Known RBP	12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	WDR4	P57081	412 aa	Known RBP	12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	PSG6	Q00889	435 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	BST1	Q10588	318 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	PDE7A	Q13946	482 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	CASP8	Q14790	479 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	ZNHIT3	Q15649	155 aa	Predicted RBP	12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	EMC4	Q5J8M3	183 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	FNDC7	Q5VTL7	733 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	ZNF787	Q6DD87	383 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	SLC30A6	Q6NXT4	461 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	ZNF585A	Q6P3V2	769 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	KRTCAP2	Q8N6L1	136 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	OR1J4	Q8NGS1	313 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	NUDT8	Q8WV74	236 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	SARAF	Q96BY9	339 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	MTERF3	Q96E29	417 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	ZNF764	Q96H86	408 aa	Predicted RBP	12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	TMEM41A	Q96HV5	264 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	PNPO	Q9NVS9	261 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	QPCTL	Q9NXS2	382 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	NKIRAS1	Q9NYS0	192 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	SPRR3	Q9UBC9	169 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	ATP6V1H	Q9UI12	483 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	MAPRE3	Q9UPY8	281 aa		12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	EIF3L	Q9Y262	564 aa	Known RBP	12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	12.94	□□□□□ -0.34
CCHCR1-222	ENST00000507459	C15orf38-AP3S2	A0A0A6YYH1	394 aa		12.93	□□□□□ -0.34
CCHCR1-222	ENST00000507459	OR14I1	A6ND48	311 aa		12.93	□□□□□ -0.34
CCHCR1-222	ENST00000507459	BCKDK	O14874	412 aa		12.93	□□□□□ -0.34
CCHCR1-222	ENST00000507459	ABCB7	O75027	752 aa		12.93	□□□□□ -0.34
CCHCR1-222	ENST00000507459	LAMP1	P11279	417 aa		12.93	□□□□□ -0.34
CCHCR1-222	ENST00000507459	DDX5	P17844	614 aa	Known RBP	12.93	□□□□□ -0.34
CCHCR1-222	ENST00000507459	ENDOU	P21128	410 aa	Known RBP	12.93	□□□□□ -0.34

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