RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 MEF2BQ02080 365 aaPredicted RBP1.12□□□□□ -2.23
CCDC93-209ENST00000488908 BCL2L1Q07817 233 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 MPPE1Q53F39 396 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 METTL11BQ5VVY1 283 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 CAVIN1Q6NZI2 390 aaKnown RBP1.12□□□□□ -2.23
CCDC93-209ENST00000488908 PODNL1Q6PEZ8 512 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 ASRGL1Q7L266 308 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 TMEM110Q86TL2 294 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 MMAAQ8IVH4 418 aaKnown RBP1.12□□□□□ -2.23
CCDC93-209ENST00000488908 AQP12AQ8IXF9 295 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 NUP93Q8N1F7 819 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 ZNF615Q8N8J6 731 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 Q8NFD4 153 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 OR7G3Q8NG95 312 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 ANKRD49Q8WVL7 239 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 ARNTL2Q8WYA1 636 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 MYDGFQ969H8 173 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 CCDC114Q96M63 670 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 CENPOQ9BU64 300 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 THUMPD3Q9BV44 507 aaKnown RBP1.12□□□□□ -2.23
CCDC93-209ENST00000488908 HCAR1Q9BXC0 346 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 GANQ9H2C0 597 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 CXXC4Q9H2H0 198 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 NXF3Q9H4D5 531 aaKnown RBP1.12□□□□□ -2.23
CCDC93-209ENST00000488908 DCTPP1Q9H773 170 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 SLC25A19Q9HC21 320 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 CENPMQ9NSP4 180 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 FAM212BQ9NTI7 297 aaPredicted RBP1.12□□□□□ -2.23
CCDC93-209ENST00000488908 TECRQ9NZ01 308 aaKnown RBP1.12□□□□□ -2.23
CCDC93-209ENST00000488908 ARMCX3Q9UH62 379 aaPredicted RBP1.12□□□□□ -2.23
CCDC93-209ENST00000488908 PSORS1C1Q9UIG5 152 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 SCML2Q9UQR0 700 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 KAT6BQ8WYB5 2073 aa1.12□□□□□ -2.23
CCDC93-209ENST00000488908 MUC6Q6W4X9 2439 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 LRRD1A4D1F6 860 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 PSMA7O14818 248 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 NBR2O15453 112 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 STX6O43752 255 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 TYROBPO43914 113 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 PDE5AO76074 875 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 SLC16A8O95907 504 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 SERPINF2P08697 491 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 WNT2P09544 360 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 GHRP10912 638 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 ZNF14P17017 642 aaPredicted RBP1.11□□□□□ -2.23
CCDC93-209ENST00000488908 HOXD10P28358 340 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 LONP1P36776 959 aaKnown RBP1.11□□□□□ -2.23
CCDC93-209ENST00000488908 MAGEB1P43366 347 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 POU3F4P49335 361 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 METAP1P53582 386 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 GEMP55040 296 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 ELAVL3Q14576 367 aaKnown RBP1.11□□□□□ -2.23
CCDC93-209ENST00000488908 STXBP2Q15833 593 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 MEDAGQ5VYS4 303 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 RTL6Q6ICC9 239 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 STEAP1BQ6NZ63 245 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 SLC25A34Q6PIV7 304 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 TMEM126BQ8IUX1 230 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 TUSC5Q8IXB3 177 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 LINC00518Q8N0U6 118 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 MDS2Q8NDY4 140 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 RFESDQ8TAC1 157 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 DCUN1D4Q92564 292 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 MR1Q95460 341 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 TEKT1Q969V4 418 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 AP2M1Q96CW1 435 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 TMEM101Q96IK0 257 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 COG3Q96JB2 828 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 SMIM14Q96QK8 99 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 IL4I1Q96RQ9 567 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 CPXM1Q96SM3 734 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 TSSK1BQ9BXA7 367 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 SLC26A1Q9H2B4 701 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 TMEM206Q9H813 350 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 DNAJC17Q9NVM6 304 aaKnown RBP1.11□□□□□ -2.23
CCDC93-209ENST00000488908 ZNF835Q9Y2P0 537 aa1.11□□□□□ -2.23
CCDC93-209ENST00000488908 C11orf98E9PRG8 122 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 EI24O14681 340 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 CHEK1O14757 476 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 CFLARO15519 480 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 NOL4O94818 638 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 TXNDC12O95881 172 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 HSP90AA1P07900 732 aaKnown RBP1.1□□□□□ -2.23
CCDC93-209ENST00000488908 HSP90AB1P08238 724 aaKnown RBP1.1□□□□□ -2.23
CCDC93-209ENST00000488908 GSTA1P08263 222 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 CYP3A5P20815 502 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 SAA4P35542 130 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 NUDT1P36639 197 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 VCPP55072 806 aaKnown RBP1.1□□□□□ -2.23
CCDC93-209ENST00000488908 SNU13P55769 128 aaKnown RBP1.1□□□□□ -2.23
CCDC93-209ENST00000488908 ST8SIA6P61647 398 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 RBP5P82980 135 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 BFSP1Q12934 665 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 KLF5Q13887 457 aaPredicted RBP1.1□□□□□ -2.23
CCDC93-209ENST00000488908 CD226Q15762 336 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 ZIC1Q15915 447 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 STX1AQ16623 288 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 FUT11Q495W5 492 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 DCST2Q5T1A1 773 aa1.1□□□□□ -2.23
CCDC93-209ENST00000488908 MPP7Q5T2T1 576 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms