RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 RTTNQ86VV8 2226 aa15.64■□□□□ 0.09
HMGN1-209ENST00000463631 HMX2A2RU54 273 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 SLC22A20A6NK97 555 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 PCSK6P29122 969 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 DEKP35659 375 aaKnown RBP15.63■□□□□ 0.09
HMGN1-209ENST00000463631 UGT2B10P36537 528 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 FEN1P39748 380 aaKnown RBP15.63■□□□□ 0.09
HMGN1-209ENST00000463631 CCNG1P51959 295 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 OR52R1Q8NGF1 315 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 SPATA3Q8NHX4 192 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 ZNF675Q8TD23 568 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 FBF1Q8TES7 1133 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 CAVIN3Q969G5 261 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 TMBIM1Q969X1 311 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 KLHL29Q96CT2 875 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 ERP27Q96DN0 273 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 ZNF681Q96N22 645 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 MED18Q9BUE0 208 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 ELOVL5Q9NYP7 299 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 CPSF2Q9P2I0 782 aaKnown RBP15.63■□□□□ 0.09
HMGN1-209ENST00000463631 DKKL1Q9UK85 242 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 PCTPQ9UKL6 214 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 PSME2Q9UL46 239 aa15.63■□□□□ 0.09
HMGN1-209ENST00000463631 A0A096LPK6 155 aa15.62■□□□□ 0.09
HMGN1-209ENST00000463631 TRIM64A6NGJ6 449 aa15.62■□□□□ 0.09
HMGN1-209ENST00000463631 TRIM64BA6NI03 449 aa15.62■□□□□ 0.09
HMGN1-209ENST00000463631 ZIC3O60481 467 aa15.62■□□□□ 0.09
HMGN1-209ENST00000463631 ERAL1O75616 437 aaKnown RBP15.62■□□□□ 0.09
HMGN1-209ENST00000463631 SMNDC1O75940 238 aaKnown RBP eCLIP15.62■□□□□ 0.094e-7■■■■□ 21.6
HMGN1-209ENST00000463631 LOXP28300 417 aaPredicted RBP15.62■□□□□ 0.09
HMGN1-209ENST00000463631 MAGEA4P43358 317 aa15.62■□□□□ 0.09
HMGN1-209ENST00000463631 B3GALT5-AS1P59052 145 aa15.62■□□□□ 0.09
HMGN1-209ENST00000463631 MRPS25P82663 173 aaKnown RBP15.62■□□□□ 0.09
HMGN1-209ENST00000463631 CAV1Q03135 178 aa15.62■□□□□ 0.09
HMGN1-209ENST00000463631 DUSP2Q05923 314 aa15.62■□□□□ 0.09
HMGN1-209ENST00000463631 GALNT1Q10472 559 aaPredicted RBP15.62■□□□□ 0.09
HMGN1-209ENST00000463631 IFT88Q13099 833 aa15.62■□□□□ 0.09
HMGN1-209ENST00000463631 TRMT12Q53H54 448 aaKnown RBP15.62■□□□□ 0.09
HMGN1-209ENST00000463631 TECRLQ5HYJ1 363 aa15.62■□□□□ 0.09
HMGN1-209ENST00000463631 VWA1Q6PCB0 445 aa15.62■□□□□ 0.09
HMGN1-209ENST00000463631 ZNF474Q6S9Z5 364 aaPredicted RBP15.62■□□□□ 0.09
HMGN1-209ENST00000463631 PTGR2Q8N8N7 351 aaPredicted RBP15.62■□□□□ 0.09
HMGN1-209ENST00000463631 ADCY4Q8NFM4 1077 aa15.62■□□□□ 0.09
HMGN1-209ENST00000463631 IGFBPL1Q8WX77 278 aa15.62■□□□□ 0.09
HMGN1-209ENST00000463631 ATP6V1E2Q96A05 226 aa15.62■□□□□ 0.09
HMGN1-209ENST00000463631 CNRIP1Q96F85 164 aaPredicted RBP15.62■□□□□ 0.09
HMGN1-209ENST00000463631 PIK3IP1Q96FE7 263 aa15.62■□□□□ 0.09
HMGN1-209ENST00000463631 UBTD1Q9HAC8 227 aa15.62■□□□□ 0.09
HMGN1-209ENST00000463631 TMCO1Q9UM00 188 aa15.62■□□□□ 0.09
HMGN1-209ENST00000463631 B4DXG7 233 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 STX16-NPEPL1H3BU86 382 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 STX16O14662 325 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 EMC8O43402 210 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 TSPAN2O60636 221 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 REM1O75628 298 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 CGAP01215 116 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 ALDOAP04075 364 aaKnown RBP15.61■□□□□ 0.09
HMGN1-209ENST00000463631 CT45A8P0DMV1 189 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 CT45A9P0DMV2 189 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 CD8BP10966 210 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 PEPDP12955 493 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 PAX1P15863 534 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 PCSK2P16519 638 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 GRK2P25098 689 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 DPP4P27487 766 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 ARL1P40616 181 aaPredicted RBP15.61■□□□□ 0.09
HMGN1-209ENST00000463631 KIR2DL2P43627 348 aaPredicted RBP15.61■□□□□ 0.09
HMGN1-209ENST00000463631 GAS1P54826 345 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 GNG11P61952 73 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 MRPS35P82673 323 aaKnown RBP15.61■□□□□ 0.09
HMGN1-209ENST00000463631 PPP2R2BQ00005 443 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 GUCY2DQ02846 1103 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 EFR3AQ14156 821 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 FGFBP1Q14512 234 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 LTB4RQ15722 352 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 CT45A2Q5DJT8 189 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 ZNF628Q5EBL2 1059 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 MROH9Q5TGP6 573 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 TTC19Q6DKK2 380 aaPredicted RBP15.61■□□□□ 0.09
HMGN1-209ENST00000463631 CXXC5Q7LFL8 322 aaKnown RBP15.61■□□□□ 0.09
HMGN1-209ENST00000463631 P4HA3Q7Z4N8 544 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 BTLAQ7Z6A9 289 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 CNEP1R1Q8N9A8 125 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 TM4SF18Q96CE8 201 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 PERPQ96FX8 193 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 PGM2Q96G03 612 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 VSTM2LQ96N03 204 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 FAM111AQ96PZ2 611 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 HS3ST6Q96QI5 342 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 SLC39A3Q9BRY0 314 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 KCNF1Q9H3M0 494 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 ELOVL6Q9H5J4 265 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 BRF2Q9HAW0 419 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 ZBTB26Q9HCK0 441 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 HEY2Q9UBP5 337 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 ZNF175Q9Y473 711 aa15.61■□□□□ 0.09
HMGN1-209ENST00000463631 USF3Q68DE3 2245 aa15.6■□□□□ 0.09
HMGN1-209ENST00000463631 HEATR5AQ86XA9 2040 aa15.6■□□□□ 0.09
HMGN1-209ENST00000463631 INAFM1C9JVW0 142 aa15.6■□□□□ 0.09
HMGN1-209ENST00000463631 SMAD7O15105 426 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms