RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 SRPX2O60687 465 aaPredicted RBP4.69□□□□□ -1.66
EPHA3-202ENST00000452448 ADAP00813 363 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 SPATA31C1P0DKV0 1188 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 SPNP16150 400 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 CD200P41217 278 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 CDH8P55286 799 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 TIMM10P62072 90 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 SREBF2Q12772 1141 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 KLF10Q13118 480 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 GRAPQ13588 217 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 GRB14Q14449 540 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 PTPRCAPQ14761 206 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 NDUFA9Q16795 377 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 MICBQ29980 383 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 CDNFQ49AH0 187 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 ZNF667Q5HYK9 610 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 CLLU1Q5K131 121 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 ANKRD22Q5VYY1 191 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 BTNL3Q6UXE8 466 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 CD300LGQ6UXG3 332 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 TMPRSS11FQ6ZWK6 438 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 CARM1Q86X55 608 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 PHF13Q86YI8 300 aaPredicted RBP4.69□□□□□ -1.66
EPHA3-202ENST00000452448 FAM58AQ8N1B3 248 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 DNAJC22Q8N4W6 341 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 OR10T2Q8NGX3 314 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 CCDC107Q8WV48 283 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 DCAKDQ8WVC6 231 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 DNAJB3Q8WWF6 145 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 ALG3Q92685 438 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 TMEM45BQ96B21 275 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 SPSB1Q96BD6 273 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 SHISA4Q96DD7 197 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 PERPQ96FX8 193 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 SENP5Q96HI0 755 aaPredicted RBP4.69□□□□□ -1.66
EPHA3-202ENST00000452448 ZNF382Q96SR6 550 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 CNN2Q99439 309 aaKnown RBP4.69□□□□□ -1.66
EPHA3-202ENST00000452448 NIPSNAP1Q9BPW8 284 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 PCGF1Q9BSM1 259 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 WDR18Q9BV38 432 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 KATNB1Q9BVA0 655 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 SLITRK2Q9H156 845 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 OR10A5Q9H207 317 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 MED20Q9H944 212 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 IL21RQ9HBE5 538 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 LPAR3Q9UBY5 353 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 FBXW2Q9UKT8 454 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 ZDHHC8Q9ULC8 765 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 SLC7A11Q9UPY5 501 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 ICKQ9UPZ9 632 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 NIP7Q9Y221 180 aaKnown RBP eCLIP4.69□□□□□ -1.66
EPHA3-202ENST00000452448 RGPD2P0DJD1 1756 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 MYH2Q9UKX2 1941 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 MEGF6O75095 1541 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 HMX2A2RU54 273 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 C17orf102A2RUQ5 167 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 K7EP13 123 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 KCNK3O14649 394 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 BNIP3LO60238 219 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 MSCO60682 206 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 MMP20O60882 483 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 GLRA3O75311 464 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 VPS26AO75436 327 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 WBP4O75554 376 aaKnown RBP4.69□□□□□ -1.66
EPHA3-202ENST00000452448 SLCO2B1O94956 709 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 LATS1O95835 1130 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 DDAH2O95865 285 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 ALDOAP04075 364 aaKnown RBP4.69□□□□□ -1.66
EPHA3-202ENST00000452448 LPLP06858 475 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 ITGA5P08648 1049 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 TMEM253P0C7T8 217 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 SERPINA2P20848 420 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 DLSTP36957 453 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 PSMD8P48556 350 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 GMPSP49915 693 aaPredicted RBP4.69□□□□□ -1.66
EPHA3-202ENST00000452448 RPL14P50914 215 aaKnown RBP4.69□□□□□ -1.66
EPHA3-202ENST00000452448 NOVA1P51513 510 aaKnown RBP4.69□□□□□ -1.66
EPHA3-202ENST00000452448 CRYBA4P53673 196 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 CTSWP56202 376 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 DNAJB13P59910 316 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 RPS16P62249 146 aaKnown RBP4.69□□□□□ -1.66
EPHA3-202ENST00000452448 SNRPD2P62316 118 aaKnown RBP4.69□□□□□ -1.66
EPHA3-202ENST00000452448 ELAVL2Q12926 359 aaKnown RBP4.69□□□□□ -1.66
EPHA3-202ENST00000452448 ECH1Q13011 328 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 SEMA3BQ13214 749 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 GAMTQ14353 236 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 GK2Q14410 553 aaPredicted RBP4.69□□□□□ -1.66
EPHA3-202ENST00000452448 LAPTM4AQ15012 233 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 MICAQ29983 383 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 TMEM249Q2WGJ8 235 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 AGKQ53H12 422 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 SOWAHCQ53LP3 525 aaPredicted RBP4.69□□□□□ -1.66
EPHA3-202ENST00000452448 ZNF691Q5VV52 312 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 PRAMEF18Q5VWM3 479 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 ZC3H14Q6PJT7 736 aaKnown RBP4.69□□□□□ -1.66
EPHA3-202ENST00000452448 ARCQ7LC44 396 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 CACUL1Q86Y37 369 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 ZNF610Q8N9Z0 462 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 CAMKVQ8NCB2 501 aa4.69□□□□□ -1.66
EPHA3-202ENST00000452448 OR10W1Q8NGF6 305 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms