RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 MTMR10Q9NXD2 777 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 TAS2R14Q9NYV8 317 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 NYAP2Q9P242 653 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 COPG2Q9UBF2 871 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 LEF1Q9UJU2 399 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 FBXW11Q9UKB1 542 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 KIAA1257Q9ULG3 409 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 SNX6Q9UNH7 406 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 TDRKHQ9Y2W6 561 aaKnown RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 TMEM184BQ9Y519 407 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 MAD1L1Q9Y6D9 718 aa3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 DDX60LQ5H9U9 1706 aaKnown RBP3.38□□□□□ -1.87
HMGB3P23-201ENST00000414981 PHLPP1O60346 1717 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 A0A0A6YYC8 382 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 C15orf38-AP3S2A0A0A6YYH1 394 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 A0A0J9YVX5 310 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 LOC100506127A0A0U1RQW1 187 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 A0A1W2PPI3 338 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 EIF4E1BA6NMX2 242 aaKnown RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZNF487B1APH4 448 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 KBTBD13C9JR72 458 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 GOLGA8SH3BPF8 625 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 I3L1I5 382 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 K7ERQ8 282 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC33A1O00400 549 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 TOM1O60784 492 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 SNNO75324 88 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 TRMUO75648 421 aaKnown RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 PDE9AO76083 593 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 LSM8O95777 96 aaKnown RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 CSTAP01040 98 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 HIST1H2ABP04908 130 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 SERPINB2P05120 415 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 ICAM1P05362 532 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 TFAP2AP05549 437 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 ASNSP08243 561 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 SERPINF2P08697 491 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 SNRPAP09012 282 aaKnown RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 CD48P09326 243 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 FAM86B2P0C5J1 330 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 FAM58BPP0C7Q3 252 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 ERVK-10P10266 1014 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 PRKAR1AP10644 381 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 MYL2P10916 166 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 ERCC2P18074 760 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 HIST1H2ADP20671 130 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 HMGB2P26583 209 aaKnown RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 CCND2P30279 289 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 CDC25CP30307 473 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 AXLP30530 894 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 FDFT1P37268 417 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 MAGEA6P43360 314 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 NSFP46459 744 aaKnown RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 CDKN1BP46527 198 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 CASP4P49662 377 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 CDK9P50750 372 aaKnown RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 CCR3P51677 355 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 ARSEP51690 589 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 NR0B1P51843 470 aaKnown RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 SMSP52788 366 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 CTSCP53634 463 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 MAP3K7CLP57077 242 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 UBE2IP63279 158 aaKnown RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 GTF2BQ00403 316 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 OTUD4Q01804 1114 aaKnown RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 SPIBQ01892 262 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 CNTN2Q02246 1040 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 SNTB2Q13425 540 aaKnown RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 PPIGQ13427 754 aaKnown RBP eCLIP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 GRAPQ13588 217 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 APOFQ13790 326 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 PIGHQ14442 188 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 KIR2DS3Q14952 304 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 NCF4Q15080 339 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 TAZQ16635 292 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 MAPK6Q16659 721 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 NDUFA5Q16718 116 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 NADK2Q4G0N4 442 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 TFDP3Q5H9I0 405 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 C10orf120Q5SQS8 335 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 GRTP1Q5TC63 336 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 RFWD3Q6PCD5 774 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 PSRC1Q6PGN9 363 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 CEACAM20Q6UY09 585 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 FRA10AC1Q70Z53 315 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 HIST3H2AQ7L7L0 130 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 HAUS6Q7Z4H7 955 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC26A11Q86WA9 606 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 CRLF3Q8IUI8 442 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 TCAIMQ8N3R3 496 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 MINDY1Q8N5J2 469 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 GCSAMQ8N6F7 178 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 L3MBTL4Q8NA19 623 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 MINDY2Q8NBR6 621 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 CAMKVQ8NCB2 501 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 FBXL13Q8NEE6 735 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 STEAP2Q8NFT2 490 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 OR6S1Q8NH40 331 aa3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZNF420Q8TAQ5 688 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC22A8Q8TCC7 542 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms