RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 H0YL77 283 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 ARPC2O15144 300 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 GPAA1O43292 621 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 TPST2O60704 377 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 WISP2O76076 250 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 OR5F1O95221 314 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 EML2O95834 649 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 IGLV2-14P01704 120 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 GSTA2P09210 222 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 GSTT2P0CG29 244 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 GSTT2BP0CG30 244 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 CD59P13987 128 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 PRF1P14222 555 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 TCN1P20061 433 aaPredicted RBP4.48□□□□□ -1.69
GABPB1-204ENST00000396464 TACR3P29371 465 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 CDH5P33151 784 aaPredicted RBP4.48□□□□□ -1.69
GABPB1-204ENST00000396464 MMP12P39900 470 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 OR3A3P47888 321 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 PPP3CCP48454 512 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 HNRNPH2P55795 449 aaKnown RBP4.48□□□□□ -1.69
GABPB1-204ENST00000396464 HERVK_113P63132 956 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 CDK16Q00536 496 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 DR1Q01658 176 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 PLOD1Q02809 727 aaPredicted RBP4.48□□□□□ -1.69
GABPB1-204ENST00000396464 TRAP1Q12931 704 aaKnown RBP4.48□□□□□ -1.69
GABPB1-204ENST00000396464 PIGHQ14442 188 aaPredicted RBP4.48□□□□□ -1.69
GABPB1-204ENST00000396464 PON2Q15165 354 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 MRPL23Q16540 153 aaKnown RBP4.48□□□□□ -1.69
GABPB1-204ENST00000396464 CCDC14Q49A88 953 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 PHLDA2Q53GA4 152 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 AARS2Q5JTZ9 985 aaKnown RBP4.48□□□□□ -1.69
GABPB1-204ENST00000396464 SLX4IPQ5VYV7 408 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 ZNF470Q6ECI4 717 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 OR4A47Q6IF82 309 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 SLC8B1Q6J4K2 584 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 FAM71F2Q6NXP2 309 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 SCYL2Q6P3W7 929 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 Q75L30 129 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 SHFQ7M4L6 423 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 RNF130Q86XS8 419 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 LGI2Q8N0V4 545 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 FGFRL1Q8N441 504 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 MFSD9Q8NBP5 474 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 TMEM104Q8NE00 496 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 NFAM1Q8NET5 270 aaPredicted RBP4.48□□□□□ -1.69
GABPB1-204ENST00000396464 OR13C3Q8NGS6 347 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 DNAAF4Q8WXU2 420 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 FAM122AQ96E09 287 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 C12orf42Q96LP6 360 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 CCDC3Q9BQI4 270 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 C1QTNF7Q9BXJ2 289 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 ERVK-6Q9BXR3 956 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 PARD6BQ9BYG5 372 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 VN1R1Q9GZP7 353 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 OPN3Q9H1Y3 402 aaPredicted RBP4.48□□□□□ -1.69
GABPB1-204ENST00000396464 LRRN3Q9H3W5 708 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 GOLPH3Q9H4A6 298 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 DPEP2Q9H4A9 486 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 RHOJQ9H4E5 214 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 LPAR2Q9HBW0 351 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 MBD2Q9UBB5 411 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 DAPK2Q9UIK4 370 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 UTS2RQ9UKP6 389 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 KLHDC2Q9Y2U9 406 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 OR1A2Q9Y585 309 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 PRDM2Q13029 1718 aa4.48□□□□□ -1.69
GABPB1-204ENST00000396464 A0A1W2PPE3 182 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 GSTTP1A0A1W2PQM5 241 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 SH3PXD2BA1X283 911 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 BTBD19C9JJ37 291 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 TMEM178BH3BS89 294 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 H3BTX0 84 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 GOLGA8RI6L899 631 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 WNT9BO14905 357 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 TRAPPC3O43617 180 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 BUD23O43709 281 aaKnown RBP4.47□□□□□ -1.69
GABPB1-204ENST00000396464 ZBTB11O95625 1053 aaPredicted RBP4.47□□□□□ -1.69
GABPB1-204ENST00000396464 CTSAP10619 480 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 ACP2P11117 423 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 ACADSP16219 412 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 STOMP27105 288 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 IL12BP29460 328 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 CD40LGP29965 261 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 YWHABP31946 246 aaKnown RBP4.47□□□□□ -1.69
GABPB1-204ENST00000396464 HTR5AP47898 357 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 CDH12P55289 794 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 ATP5J2P56134 94 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 TSPAN5P62079 268 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 PSMC5P62195 406 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 ERVK-8P63133 956 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 KDSRQ06136 332 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 PMS2P3Q13401 168 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 CRMP1Q14194 572 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 MESDQ14696 234 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 ACSF3Q4G176 576 aaPredicted RBP4.47□□□□□ -1.69
GABPB1-204ENST00000396464 SMUG1Q53HV7 270 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 SFT2D3Q587I9 215 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 VITQ6UXI7 678 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 ASCL4Q6XD76 172 aa4.47□□□□□ -1.69
GABPB1-204ENST00000396464 Q6ZNX1 250 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms