RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 VEGFCP49767 419 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 SNRPD1P62314 119 aaKnown RBP8.33□□□□□ -1.08
RTN4-206ENST00000394611 CBX2Q14781 532 aaPredicted RBP8.33□□□□□ -1.08
RTN4-206ENST00000394611 PCBP1Q15365 356 aaKnown RBP eCLIP8.33□□□□□ -1.086e-8■■□□□ 14.5
RTN4-206ENST00000394611 GRK1Q15835 563 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 GXYLT1Q4G148 440 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 LIN54Q6MZP7 749 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 ACSM5Q6NUN0 579 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 TECPR1Q7Z6L1 1165 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 TAF8Q7Z7C8 310 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 LACC1Q8IV20 430 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 DENND6BQ8NEG7 585 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 PJA1Q8NG27 643 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 WFDC5Q8TCV5 224 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 SLC35G5Q96KT7 338 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 TREM1Q9NP99 234 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 RBFOX1Q9NWB1 397 aaKnown RBP8.33□□□□□ -1.08
RTN4-206ENST00000394611 MARK1Q9P0L2 795 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 GNG8Q9UK08 70 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 PCDHGB2Q9Y5G2 931 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 ENPP4Q9Y6X5 453 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.33□□□□□ -1.08
RTN4-206ENST00000394611 SYN3O14994 580 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 YY2O15391 372 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 S100A9P06702 114 aaKnown RBP8.33□□□□□ -1.08
RTN4-206ENST00000394611 HBQ1P09105 142 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 RAB3BP20337 219 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 WNT4P56705 351 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 ZNF763Q0D2J5 394 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 CDC20Q12834 499 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 ZNF79Q15937 498 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 CLPPQ16740 277 aaPredicted RBP8.33□□□□□ -1.08
RTN4-206ENST00000394611 TP53I3Q53FA7 332 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 ZNF385BQ569K4 471 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 GDPD1Q8N9F7 314 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 CHST14Q8NCH0 376 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 OR4M1Q8NGD0 313 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 WDR20Q8TBZ3 569 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 ST8SIA4Q92187 359 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 TADA1Q96BN2 335 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 DHRS9Q9BPW9 319 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 MVB12BQ9H7P6 319 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 ARNT2Q9HBZ2 717 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 CORO2BQ9UQ03 480 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 SOCS6O14544 535 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 TO15178 435 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 PPIBP23284 216 aaKnown RBP8.33□□□□□ -1.08
RTN4-206ENST00000394611 VAMP1P23763 118 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 ACRV1P26436 265 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 PSMB5P28074 263 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 MAGEB1P43366 347 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 CXCR4P61073 352 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 ST8SIA6P61647 398 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 TBPL1P62380 186 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 KCNJ10P78508 379 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 TAF13Q15543 124 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 ARHGAP15Q53QZ3 475 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 RTP2Q5QGT7 225 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 PODNL1Q6PEZ8 512 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 NRMQ8IXM6 262 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 GPR135Q8IZ08 494 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 ANKK1Q8NFD2 765 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 SLC22A12Q96S37 553 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 KATNB1Q9BVA0 655 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 ACTR6Q9GZN1 396 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 SLC6A16Q9GZN6 736 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 RDH14Q9HBH5 336 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 NLGN3Q9NZ94 848 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 PHF11Q9UIL8 331 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 PADI2Q9Y2J8 665 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 CHD5Q8TDI0 1954 aa8.33□□□□□ -1.08
RTN4-206ENST00000394611 DISC1C4P0D8 188 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 MPZL2O60487 215 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 C6P13671 934 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 HSD3B1P14060 373 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 HK1P19367 917 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 ELK1P19419 428 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 NTSP30990 170 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 HMGCLP35914 325 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 OMPP47874 163 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 PPP3R1P63098 170 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 FABP5Q01469 135 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 SCRN3Q0VDG4 424 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 GPR176Q14439 515 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 ADGRF1Q5T601 910 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 PRPF38BQ5VTL8 546 aaKnown RBP8.32□□□□□ -1.08
RTN4-206ENST00000394611 RAB12Q6IQ22 244 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 SLC27A4Q6P1M0 643 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 FUT10Q6P4F1 479 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 NCEH1Q6PIU2 408 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 C6orf120Q7Z4R8 191 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 LNX2Q8N448 690 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 OXR1Q8N573 874 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 HORMAD2Q8N7B1 307 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 BBS1Q8NFJ9 593 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 ZFAND1Q8TCF1 268 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 TSNAXQ99598 290 aaKnown RBP8.32□□□□□ -1.08
RTN4-206ENST00000394611 KLHL31Q9H511 634 aa8.32□□□□□ -1.08
RTN4-206ENST00000394611 ZMAT3Q9HA38 289 aaKnown RBP8.32□□□□□ -1.08
RTN4-206ENST00000394611 USP36Q9P275 1121 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms