RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 SF3B4Q15427 424 aaKnown RBP eCLIP7.99□□□□□ -1.131e-8■■■■■ 57.9
HSPG2-203ENST00000374695 CERS5Q8N5B7 392 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 NAXEQ8NCW5 288 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 GATA6Q92908 595 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 NUDT19A8MXV4 375 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 B4DGG1 531 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 RHOP08100 348 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 C1orf94Q6P1W5 598 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 KDELC1Q6UW63 502 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 OR1S1Q8NH92 325 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 MITD1Q8WV92 249 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 SLC6A5Q9Y345 797 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 EMC8O43402 210 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 AP1G1O43747 822 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 MRPL3P09001 348 aaKnown RBP7.99□□□□□ -1.13
HSPG2-203ENST00000374695 RPL35P42766 123 aaKnown RBP7.99□□□□□ -1.13
HSPG2-203ENST00000374695 PLGLAQ15195 96 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 PCGF3Q3KNV8 242 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 ZNF75AQ96N20 296 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 SLC38A1Q9H2H9 487 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 LOC102723532A0A0G2JNH3 316 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 SPDEFO95238 335 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 SERPINF1P36955 418 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 MOGSQ13724 837 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 MANEALQ5VSG8 457 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 ELP2Q6IA86 826 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 POLE4Q9NR33 117 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 C14orf119Q9NWQ9 140 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 SARDHQ9UL12 918 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 LOC730098B7Z3J9 87 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 CNOT4O95628 575 aaKnown RBP7.99□□□□□ -1.13
HSPG2-203ENST00000374695 SERPINE2P07093 398 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 CCL23P55773 120 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 DBPQ10586 325 aaPredicted RBP7.99□□□□□ -1.13
HSPG2-203ENST00000374695 OR52E8Q6IFG1 317 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 AKT1S1Q96B36 256 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 MGLLQ99685 303 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 PAPOLGQ9BWT3 736 aaKnown RBP7.99□□□□□ -1.13
HSPG2-203ENST00000374695 ACTR10Q9NZ32 417 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 PCNX2A6NKB5 2137 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 BCL9LQ86UU0 1499 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 A0A1W2PPW3 197 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 ZNF8P17098 575 aaPredicted RBP7.99□□□□□ -1.13
HSPG2-203ENST00000374695 WDR4P57081 412 aaKnown RBP7.99□□□□□ -1.13
HSPG2-203ENST00000374695 FAM110CQ1W6H9 321 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 PROX2Q3B8N5 592 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 TMEM41BQ5BJD5 291 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 RBM23Q86U06 439 aaKnown RBP7.99□□□□□ -1.13
HSPG2-203ENST00000374695 SGTBQ96EQ0 304 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 C8orf33Q9H7E9 229 aaPredicted RBP7.99□□□□□ -1.13
HSPG2-203ENST00000374695 CACNG2Q9Y698 323 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 hCG_1807616A0A1W2PRN6 198 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 A8MUA0 341 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 ZNF487B1APH4 448 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 ALX3O95076 343 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 DUSP7Q16829 419 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 NANOGP8Q6NSW7 305 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 ABHD12BQ7Z5M8 362 aaPredicted RBP7.99□□□□□ -1.13
HSPG2-203ENST00000374695 CNIH3Q8TBE1 160 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 TTYH3Q9C0H2 523 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 NANOGQ9H9S0 305 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 SMCO4Q9NRQ5 59 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 BHLHE40O14503 412 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 C8AP07357 584 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 DCNP07585 359 aaKnown RBP7.99□□□□□ -1.13
HSPG2-203ENST00000374695 RAB35Q15286 201 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 CD300LGQ6UXG3 332 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 CMASQ8NFW8 434 aaPredicted RBP7.99□□□□□ -1.13
HSPG2-203ENST00000374695 TXNDC15Q96J42 360 aa7.99□□□□□ -1.13
HSPG2-203ENST00000374695 COL3A1P02461 1466 aaPredicted RBP7.99□□□□□ -1.13
HSPG2-203ENST00000374695 OR51F1A6NGY5 319 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 UPK1BO75841 260 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 ITGB5P18084 799 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 CAV2P51636 162 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 EIF4HQ15056 248 aaKnown RBP7.98□□□□□ -1.13
HSPG2-203ENST00000374695 RNF111Q6ZNA4 994 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 OR5P2Q8WZ92 322 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 ZNF681Q96N22 645 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 SLC2A4RGQ9NR83 387 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 KCNIP2Q9NS61 270 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 PCDHGA6Q9Y5G7 932 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 GTF3C1Q12789 2109 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 A0A087WUU8 490 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 HBE1P02100 147 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 ALDOBP05062 364 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 SRPXP78539 464 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 FGFBP1Q14512 234 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 NCBP2-AS2Q69YL0 99 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 OR2T35Q8NGX2 323 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 SORCS1Q8WY21 1168 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 NID2Q14112 1375 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 DUSP11O75319 330 aaKnown RBP7.98□□□□□ -1.13
HSPG2-203ENST00000374695 CSNK2A1P68400 391 aaPredicted RBP7.98□□□□□ -1.13
HSPG2-203ENST00000374695 CSNK2A3Q8NEV1 391 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 ZNF461Q8TAF7 563 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 NDRG1Q92597 394 aaKnown RBP7.98□□□□□ -1.13
HSPG2-203ENST00000374695 LRR1Q96L50 414 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 PLEKHJ1Q9NW61 149 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 POU2F3Q9UKI9 436 aa7.98□□□□□ -1.13
HSPG2-203ENST00000374695 AGAP14A8MT82 685 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms